East Africa

Link to all East Africa Publications in PubMed

Brazier, Ellen; Tymejczyk, Olga; Zaniewski, Elizabeth; Egger, Matthias; Wools-Kaloustian, Kara et al. (2021). Effects of national adoption of Treat-All guidelines on pre-ART CD4 testing and viral load monitoring after ART initiation: A regression discontinuity analysis. Clinical Infectious Diseases, S. ciab222. http://doi.org/10.1093/cid/ciab222.
Desmonde, Sophie; Ciaranello, Andrea L.; Malateste, Karen; Musick, Beverly; Patten, Gabriela et al. (2020). Age-specific mortality rate ratios in adolescents and youth aged 10–24 years living with perinatally versus non-perinatally-acquired HIV. AIDS, Publish Ahead of Print. http://doi.org/10.1097/QAD.0000000000002765.
Mpofu, Philani B.; Bakoyannis, Giorgos; Yiannoutsos, Constantin T.; Mwangi, Ann W. & Mburu, Margaret (2020). A pseudo‐likelihood method for estimating misclassification probabilities in competing‐risks settings when true‐event data are partially observed. Biometrical Journal, 62 (7), S. 1747–1768. http://doi.org/10.1002/bimj.201900198.
Patsis, Ioannis; Goodrich, Suzanne; Yiannoutsos, Constantin T.; Brown, Steven A.; Musick, Beverly S. et al. (2020). Lower rates of ART initiation and decreased retention among ART-naïve patients who consume alcohol enrolling in HIV care and treatment programs in Kenya and Uganda. PLoS ONE, 15 (10 October 2020). http://doi.org/10.1371/journal.pone.0240654.
Rebeiro, Peter F.; Duda, Stephany N.; Wools-Kaloustian, Kara K.; Nash, Denis & Althoff, Keri N. (2020). Implications of COVID-19 for HIV Research: data sources, indicators and longitudinal analyses. Journal of the International AIDS Society, 23 (10), S. e25627–e25627. http://doi.org/10.1002/jia2.25627.
Desmonde, Sophie; Neilan, Anne M.; Musick, Beverly; Patten, Gabriela; Chokephaibulkit, Kulkanya et al. (2020). Time-varying age- and CD4-stratified rates of mortality and WHO stage 3 and stage 4 events in children, adolescents and youth 0 to 24 years living with perinatally acquired HIV, before and after antiretroviral therapy initiation in the paediatric IeDEA Gl. Journal of the International AIDS Society, 23 (10), S. e25617–e25617. http://doi.org/10.1002/jia2.25617.
Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee et al. (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-Naive Patients. Antimicrobial Agents and Chemotherapy, 64 (11). http://doi.org/10.1128/AAC.00513-20.
Seth, Divya; Williams, Victoria L.; McMahon, Devon E.; Regan, Susan; Busakhala, Naftali et al. (2020). The role of dermatology in Kaposi sarcoma diagnosis across three regions in sub-Saharan Africa. Journal of the American Academy of Dermatology. http://doi.org/10.1016/j.jaad.2020.07.114.
Parcesepe, Angela M.; Lancaster, Kathryn; Edelman, E. Jennifer; DeBoni, Raquel; Ross, Jeremy et al. (2020). Substance use service availability in HIV treatment programs: Data from the global IeDEA consortium, 2014-2015 and 2017. PLoS ONE, 15 (8 August), S. e0237772–e0237772. http://doi.org/10.1371/journal.pone.0237772.
Loiseau, Chloé; Brites, Daniela; Reinhard, Miriam; Zürcher, Kathrin; Borrell, Sonia et al. (2020). HIV coinfection is associated with low fitness rpoB variants in rifampicin-resistant Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. http://doi.org/10.1128/AAC.00782-20.
Patten, Gabriela; Puthanakit, Thanyawee; McGowan, Catherine C.; Wools-Kaloustian, Kara; Hazra, Rohan et al. (2020). Raltegravir use and outcomes among children and adolescents living with HIV in the IeDEA global consortium. Journal of the International AIDS Society, 23 (7). http://doi.org/10.1002/jia2.25580.
Harezlak, Jaroslaw; Sarwat, Samiha; Wools-Kaloustian, Kara; Schomaker, Michael; Balestre, Eric et al. (2020). PS-SiZer map to investigate significant features of body-weight profile changes in HIV infected patients in the IeDEA Collaboration. PLoS ONE, 15 (5). http://doi.org/10.1371/journal.pone.0220165.
Chammartin, Frédérique; Dao Ostinelli, Cam Ha; Anastos, Kathryn; Jaquet, Antoine; Brazier, Ellen et al. (2020). International epidemiology databases to evaluate AIDS (IeDEA) in sub-Saharan Africa, 2012-2019. BMJ Open, 10 (5). http://doi.org/10.1136/bmjopen-2019-035246.
Jesson, Julie; Desmonde, Sophie; Yiannoutsos, Constantin T.; Patten, Gabriela; Malateste, Karen et al. (2020). Weight-for-age distributions among children with HIV on antiretroviral therapy in the International epidemiology Databases to Evaluate AIDS (IeDEA) multiregional consortium. BMC Research Notes, 13 (1), S. 249–249. http://doi.org/10.1186/s13104-020-05081-7.
Patel, Kunjal; Smith, Colette; Collins, Intira Jeannie; Goodall, Ruth; Abrams, Elaine J. et al. (2020). Outcomes of second-line antiretroviral therapy among children living with HIV: a global cohort analysis. Journal of the International AIDS Society, 23 (4). http://doi.org/10.1002/jia2.25477.
IeDEA and COHERE in EuroCoord Cohort Collaboration (2020). All-cause mortality after antiretroviral therapy initiation in HIV-positive women from Europe, Sub-Saharan Africa and the Americas. AIDS, 34 (2), S. 277–289. http://doi.org/10.1097/QAD.0000000000002399.
Bakoyannis, Giorgos; Zhang, Ying & Yiannoutsos, Constantin T. (2020). Semiparametric regression and risk prediction with competing risks data under missing cause of failure. Lifetime Data Analysis, 26 (4), S. 659–684. http://doi.org/10.1007/s10985-020-09494-1.
Freeman, Esther E.; Busakhala, Naftali; Regan, Susan; Asirwa, Fredrick Chite; Wenger, Megan et al. (2020). Real-world use of chemotherapy for Kaposi’s sarcoma in a large community-based HIV primary care system in Kenya. BMC Cancer, 20 (1), S. 71–71. http://doi.org/10.1186/s12885-019-6506-3.
Humphrey, John M.; Mpofu, Philani; Pettit, April C.; Musick, Beverly; Carter, E. Jane et al. (2020). Mortality Among People With HIV Treated for Tuberculosis Based on Positive, Negative, or No Bacteriologic Test Results for Tuberculosis: The IeDEA Consortium. Open Forum Infectious Diseases, 7 (1), S. ofaa006–ofaa006. http://doi.org/10.1093/ofid/ofaa006.
Althoff, Keri N.; Chandran, Aruna; Zhang, Jinbing; Arevalo, Wendy Miranda; Gange, Stephen J. et al. (2019). Life-Expectancy Disparities Among Adults With HIV in the United States and Canada: The Impact of a Reduction in Drug- and Alcohol-Related Deaths Using the Lives Saved Simulation Model. American Journal of Epidemiology, 188 (12), S. 2097–2109. http://doi.org/10.1093/aje/kwz232.
Edwards, Jessie K.; Bakoyannis, Giorgos; Yiannoutsos, Constantin T.; Mburu, Margaret W. & Cole, Stephen R. (2019). Nonparametric estimation of the cumulative incidence function under outcome misclassification using external validation data. Statistics in Medicine, 38 (29), S. 5512–5527. http://doi.org/10.1002/sim.8380.
Johnson, Leigh F.; Anderegg, Nanina; Zaniewski, Elizabeth; Eaton, Jeffrey W.; Rebeiro, Peter F. et al. (2019). Global variations in mortality in adults after initiating antiretroviral treatment: an updated analysis of the International epidemiology Databases to Evaluate AIDS cohort collaboration. AIDS (London, England), 33 Suppl 3, S. S283–S294. http://doi.org/10.1097/QAD.0000000000002358.
Pettit, April C.; Jenkins, Cathy A.; Blevins Peratikos, Meridith; Yotebieng, Marcel; Diero, Lameck et al. (2019). Directly observed therapy and risk of unfavourable tuberculosis treatment outcomes among an international cohort of people living with HIV in low- and middle-income countries. Journal of the International AIDS Society, 22 (12), S. e25423–e25423. http://doi.org/10.1002/jia2.25423.
Stover, John; Glaubius, Robert; Mofenson, Lynne; Dugdale, Caitlin M.; Davies, Mary Ann et al. (2019). Updates to the Spectrum/AIM model for estimating key HIV indicators at national and subnational levels. AIDS, 33, S. S227–S234. http://doi.org/10.1097/QAD.0000000000002357.
Jesson, Julie; Schomaker, Michael; Malasteste, Karen; Wati, Dewi K.; Kariminia, Azar et al. (2019). Stunting and growth velocity of adolescents with perinatally acquired HIV: differential evolution for males and females. A multiregional analysis from the IeDEA global paediatric collaboration. Journal of the International AIDS Society, 22 (11), S. e25412–e25412. http://doi.org/10.1002/jia2.25412.
Tymejczyk, Olga; Brazier, Ellen; Wools-Kaloustian, Kara; Davies, Mary-Ann; DiLorenzo, Madeline et al. (2019). Impact of universal antiretroviral treatment eligibility on rapid treatment initiation among young adolescents with HIV in sub-Saharan Africa. The Journal of Infectious Diseases. http://doi.org/10.1093/infdis/jiz547.
Genberg, Becky L.; Hogan, Joseph W.; Xu, Yizhen; Nyambura, Monicah; Tarus, Caren et al. (2019). Population-based estimates of engagement in HIV care and mortality using double-sampling methods following home-based counseling and testing in western Kenya. PLoS ONE, 14 (10). http://doi.org/10.1371/journal.pone.0223187.
Boettiger, David C.; Law, Matthew G.; Sohn, Annette H.; Davies, Mary Ann; Wools-Kaloustian, Kara et al. (2019). Temporal Trends in Co-trimoxazole Use Among Children on Antiretroviral Therapy and the Impact of Co-trimoxazole on Mortality Rates in Children Without Severe Immunodeficiency. Journal of the Pediatric Infectious Diseases Society, 8 (5), S. 450–460. http://doi.org/10.1093/jpids/piy087.
Zürcher, Kathrin; Ballif, Marie; Kiertiburanakul, Sasisopin; Chenal, Henri; Yotebieng, Marcel et al. (2019). Diagnosis and clinical outcomes of extrapulmonary tuberculosis in antiretroviral therapy programmes in low- and middle-income countries: a multicohort study. Journal of the International AIDS Society, 22 (9), S. e25392–e25392. http://doi.org/10.1002/jia2.25392.
Brazier, Ellen; Maruri, Fernanda; Duda, Stephany N.; Tymejczyk, Olga; Wester, C. William et al. (2019). Implementation of “Treat-all” at adult HIV care and treatment sites in the Global IeDEA Consortium: results from the Site Assessment Survey. Journal of the International AIDS Society, 22 (7), S. e25331–e25331. http://doi.org/10.1002/jia2.25331.
Park, Jun; Bakoyannis, Giorgos & Yiannoutsos, Constantin T. (2019). Semiparametric competing risks regression under interval censoring using the R package intccr. Computer Methods and Programs in Biomedicine, 173, S. 167–176. http://doi.org/10.1016/j.cmpb.2019.03.002.
Vreeman, Rachel C.; Scanlon, Michael L.; Tu, Wanzhu; Slaven, James E.; McAteer, Carole I. et al. (2019). Validation of a self-report adherence measurement tool among a multinational cohort of children living with HIV in Kenya, South Africa and Thailand. Journal of the International AIDS Society, 22 (5), S. e25304–e25304. http://doi.org/10.1002/jia2.25304.
Humphrey, John M.; Genberg, Becky L.; Keter, Alfred; Musick, Beverly; Apondi, Edith et al. (2019). Viral suppression among children and their caregivers living with HIV in western Kenya. Journal of the International AIDS Society, 22 (4), S. e25272–e25272. http://doi.org/10.1002/jia2.25272.
Zürcher, Kathrin; Ballif, Marie; Fenner, Lukas; Borrell, Sonia; Keller, Peter M. et al. (2019). Drug susceptibility testing and mortality in patients treated for tuberculosis in high-burden countries: a multicentre cohort study. The Lancet Infectious Diseases, 19 (3), S. 298–307. http://doi.org/10.1016/S1473-3099(18)30673-X.
Collaborative Initiative for Paediatric HIV Education and Research (CIPHER) Global Cohort Collaboration, Intira J.; Wools-Kaloustian, Kara; Goodall, Ruth; Smith, Colette; Abrams, Elaine J. et al. (2019). Incidence of switching to second-line antiretroviral therapy and associated factors in children with HIV: an international cohort collaboration. The Lancet. HIV, 6 (2), S. e105–e115. http://doi.org/10.1016/S2352-3018(18)30319-9.
Miles, Caleb H.; Petersen, Maya & van der Laan, Mark J. (2019). Causal inference when counterfactuals depend on the proportion of all subjects exposed. Biometrics, S. biom.13034-biom.13034. http://doi.org/10.1111/biom.13034.
Yotebieng, Marcel; Brazier, Ellen; Addison, Diane; Kimmel, April D.; Cornell, Morna et al. (2019). Research priorities to inform “Treat All” policy implementation for people living with HIV in sub-Saharan Africa: a consensus statement from the International epidemiology Databases to Evaluate AIDS (IeDEA). Journal of the International AIDS Society, 22 (1), S. e25218–e25218. http://doi.org/10.1002/jia2.25218.
Patel, Rena C.; Jakait, Beatrice; Thomas, Katherine; Yiannoutsos, Constantin; Onono, Maricianah et al. (2019). Increasing body mass index or weight does not appear to influence the association between efavirenz-based antiretroviral therapy and implant effectiveness among HIV-positive women in western Kenya. Contraception, 100 (4), S. 288–295. http://doi.org/10.1016/j.contraception.2019.06.011.
Okello, Samson; Kim, June‐Ho; Sentongo, Ruth N.; Tracy, Russell; Tsai, Alexander C. et al. (2019). Blood pressure trajectories and the mediated effects of body mass index and HIV‐related inflammation in a mixed cohort of people with and without HIV in rural Uganda. The Journal of Clinical Hypertension, 21 (8), S. 1230–1241. http://doi.org/10.1111/jch.13621.
Olney, Jack J.; Eaton, Jeffrey W.; Braitstein, Paula; Hogan, Joseph W. & Hallett, Timothy B. (2019). Response to Questionable assumptions mar modelling of Kenya home‐based testing campaigns ‐ a comment on “Optimal timing of HIV home‐based counselling and testing rounds in Western Kenya” (Olney et al. 2018). Journal of the International AIDS Society, 22 (1), S. e25231. http://doi.org/10.1002/jia2.25231.
Bakoyannis, Giorgos; Zhang, Ying & Yiannoutsos, Constantin T. (2019). NONPARAMETRIC INFERENCE FOR MARKOV PROCESSES WITH MISSING ABSORBING STATE. Statistica Sinica, 29 (4), S. 2083–2104. http://doi.org/10.5705/ss.202017.0175.
Tran, Linh; Yiannoutsos, Constantin; Wools-Kaloustian, Kara; Siika, Abraham; Van Der Laan, Mark et al. (2019). Double Robust Efficient Estimators of Longitudinal Treatment Effects: Comparative Performance in Simulations and a Case Study. International Journal of Biostatistics, 15 (2). http://doi.org/10.1515/ijb-2017-0054.
Tymejczyk, Olga; Brazier, Ellen; Yiannoutsos, Constantin T.; Vinikoor, Michael; van Lettow, Monique et al. (2019). Changes in rapid HIV treatment initiation after national “treat all” policy adoption in 6 sub-Saharan African countries: Regression discontinuity analysis. PLoS Medicine, 16 (6), S. e1002822–e1002822. http://doi.org/10.1371/journal.pmed.1002822.
Kariminia, Azar; Law, Matthew; Davies, Mary‐Ann; Vinikoor, Michael; Wools‐Kaloustian, Kara et al. (2018). Mortality and losses to follow‐up among adolescents living with HIV in the Ie DEA global cohort collaboration. Journal of the International AIDS Society, 21 (12), S. e25215–e25215. http://doi.org/10.1002/jia2.25215.
Parcesepe, Angela M.; Bernard, Charlotte; Agler, Robert; Ross, Jeremy; Yotebieng, Marcel et al. (2018). Mental health and HIV: research priorities related to the implementation and scale up of “treat all” in sub-Saharan Africa. Journal of Virus Eradication, 4 (Suppl 2), S. 16–25. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/30515310
Abuogi, Lisa L.; Humphrey, John M.; Mpody, Christian; Yotebieng, Marcel; Murnane, Pamela M. et al. (2018). Achieving UNAIDS 90-90-90 targets for pregnant and postpartum women in sub-Saharan Africa: progress, gaps and research needs. Journal of Virus Eradication, 4 (Suppl 2), S. 33–39. http://doi.org/10.1016/s2055-6640(20)30343-5.
Lancaster, Kathryn E.; Hetrick, Angela; Jaquet, Antoine; Adedimeji, Adebola; Atwoli, Lukoye et al. (2018). Substance use and universal access to HIV testing and treatment in sub-Saharan Africa: Implications and research priorities. Journal of Virus Eradication, 4 (Suppl 2), S. 26–32. http://doi.org/10.1016/S2055-6640(20)30342-3.
Zaniewski, Elizabeth; Tymejczyk, Olga; Kariminia, Azar; Desmonde, Sophie; Leroy, Valériane et al. (2018). IeDEA-WHO Research-Policy Collaboration: contributing real-world evidence to HIV progress reporting and guideline development. Journal of Virus Eradication, 4 (Suppl 2), S. 9–15. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/30515309
Panayidou, Klea; Davies, Mary-Ann; Anderegg, Nanina; Egger, Matthias & IeDEA, COHERE, PHACS and IMPAACT 219C Collaborations Writing Group (2018). Global temporal changes in the proportion of children with advanced disease at the start of combination antiretroviral therapy in an era of changing criteria for treatment initiation. Journal of the International AIDS Society, 21 (11), S. e25200–e25200. http://doi.org/10.1002/jia2.25200.
Apondi, Edith; Humphrey, John M.; Sang, Edwin; Mwangi, Ann; Keter, Alfred et al. (2018). Trends Over Time for Adolescents Enrolling in HIV Care in Kenya, Tanzania, and Uganda From 2001-2014. Journal of Acquired Immune Deficiency Syndromes, 79 (2), S. 164–172. http://doi.org/10.1097/QAI.0000000000001796.