East Africa regional publications

2018

Andreas D Haas, Elizabeth Zaniewski, Nanina Anderegg, Nathan Ford, Matthew P Fox, Michael Vinikoor, François Dabis, Denis Nash, Jean d'Amour Sinayobye, Thêodore Niyongabo, Aristophane Tanon, Armel Poda, Adebola A Adedimeji, Andrew Edmonds, Mary-Ann Davies, Matthias Egger, African regions of the International epidemiologic Databases to Evaluate AIDS (IeDEA) (2018) Retention and mortality on antiretroviral therapy in sub-Saharan Africa: collaborative analyses of HIV treatment programmes., Journal of the International AIDS Society 21(2), p. e25084, url, doi:10.1002/jia2.25084

Rachel C Vreeman, Samuel O Ayaya, Beverly S Musick, Constantin T Yiannoutsos, Craig R Cohen, Denis Nash, Deo Wabwire, Kara Wools-Kaloustian, Sarah E Wiehe (2018) Adherence to antiretroviral therapy in a clinical cohort of HIV-infected children in East Africa., PloS one 13(2), Mulugeta Belay (ed.), p. e0191848, url, doi:10.1371/journal.pone.0191848

Harriet Nuwagaba-Biribonwoha, Agnes N Kiragga, Constantin T Yiannoutsos, Beverly S Musick, Kara K Wools-Kaloustian, Samuel Ayaya, Hilary Wolf, Emmanuel Lugina, John Ssali, Elaine J Abrams, Batya Elul, International epidemiology Databases to Evaluate AIDS (IeDEA) East Africa Collaboration (2018) Adolescent pregnancy at antiretroviral therapy (ART) initiation: a critical barrier to retention on ART., Journal of the International AIDS Society 21(9), p. e25178, url, doi:10.1002/jia2.25178

Elise Arrivé, Samuel Ayaya, Mary-Ann Davies, Cleophas Chimbetete, Andrew Edmonds, Patricia Lelo, Siew Moy Fong, Kamarul Azahar Razali, Kouadio Kouakou, Stephany N Duda, Valériane Leroy, Rachel C Vreeman, IeDEA Pediatric Working Group (2018) Models of support for disclosure of HIV status to HIV-infected children and adolescents in resource-limited settings., Journal of the International AIDS Society 21(7), p. e25157, url, doi:10.1002/jia2.25157

Liangyuan Hu, Joseph W Hogan, Ann W Mwangi, Abraham Siika (2018) Modeling the causal effect of treatment initiation time on survival: Application to HIV/TB co-infection., Biometrics 74(2), p. 703-713, url, doi:10.1111/biom.12780

Abraham Siika, Leanne McCabe, Mutsa Bwakura-Dangarembizi, Cissy Kityo, Jane Mallewa, Jay Berkley, Kath Maitland, Anna Griffiths, Keith Baleeta, Shepherd Mudzingwa, James Abach, Kusum Nathoo, Margaret J Thomason, Andrew J Prendergast, Ann Sarah Walker, Diana M Gibb, P REALITY Trial Team, C Kityo, V Musiime, P Wavamunno, E Nambi, P Ocitti, M Ndigendawani, M Kemigisa, J Acen, D Olebo, G Mpamize, A Amone, D Okweny, A Mbonye, F Nambaziira, A Rweyora, M Kangah, V Kabaswahili, J Abach, G Abongomera, J Omongin, I Aciro, A Philliam, B Arach, E Ocung, G Amone, P Miles, C Adong, C Tumsuiime, P Kidega, B Otto, F Apio, K Baleeta, A Mukuye, M Abwola, F Ssennono, D Baliruno, S Tuhirwe, R Namisi, F Kigongo, D Kikyonkyo, F Mushahara, D Okweny, J Tusiime, A Musiime, A Nankya, D Atwongyeire, S Sirikye, S Mula, N Noowe, A Lugemwa, M Kasozi, S Mwebe, L Atwine, T Senkindu, T Natuhurira, C Katemba, E Ninsiima, M Acaku, J Kyomuhangi, R Ankunda, D Tukwasibwe, L Ayesiga, J Hakim, K Nathoo, M Bwakura-Dangarembizi, A Reid, E Chidziva, T Mhute, GC Tinago, J Bhiri, S Mudzingwa, M Phiri, J Steamer, R Nhema, C Warambwa, G Musoro, S Mutsai, B Nemasango, C Moyo, S Chitongo, K Rashirai, S Vhembo, B Mlambo, S Nkomani, B Ndemera, M Willard, C Berejena, Y Musodza, P Matiza, B Mudenge, V Guti, A Etyang, C Agutu, J Berkley, K Maitland, P Njuguna, S Mwaringa, T Etyang, K Awuondo, S Wale, J Shangala, J Kithunga, S Mwarumba, S Said Maitha, R Mutai, M Lozi Lewa, G Mwambingu, A Mwanzu, C Kalama, H Latham, J Shikuku, A Fondo, A Njogu, C Khadenge, B Mwakisha, A Siika, K Wools-Kaloustian, W Nyandiko, P Cheruiyot, A Sudoi, S Wachira, B Meli, M Karoney, A Nzioka, M Tanui, M Mokaya, W Ekiru, C Mboya, D Mwimali, C Mengich, J Choge, W Injera, K Njenga, S Cherutich, M Anyango Orido, G Omondi Lwande, P Rutto, A Mudogo, I Kutto, A Shali, L Jaika, H Jerotich, M Pierre, J Mallewa, S Kaunda, J Van Oosterhout, B O’Hare, R Heydermann, C Gonzalez, N Dzabala, C Kelly, B Denis, G Selemani, L Nyondo Mipando, E Chirwa, P Banda, L Mvula, H Msuku, M Ziwoya, Y Manda, S Nicholas, C Masesa, T Mwalukomo, L Makhaza, I Sheha, J Bwanali, M Limbuni, D Gibb, M Thomason, AS Walker, S Pett, A Szubert, A Griffiths, H Wilkes, C Rajapakse, M Spyer, A Prendergast, N Klein, N Van Looy, E Little, K Fairbrother, F Cowan, J Seeley, S Bernays, R Kawuma, Z Mupambireyi, F Kyomuhendo, S Nakalanzi, J Peshu, S Ndaa, J Chabuka, N Mkandawire, L Matandika, C Kapuya, I Weller, E Malianga, C Mwansambo, F Miiro, P Elyanu, E Bukusi, E Katabira, O Mugurungi, D Gibb, J Hakim, A Etyang, P Mugyenyi, J Mallewa, T Peto, P Musoke, J Matenga, S Phiri, H Lyall, V Johnston, F Fitzgerald, F Post, F Ssali, A Prendergast, A Arenas-Pinto, A Turkova, A Bamford (2018) Late Presentation With HIV in Africa: Phenotypes, Risk, and Risk Stratification in the REALITY Trial., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 66(suppl_2), p. S140-S146, url, doi:10.1093/cid/cix1142

Amy L. Collaborative Initiative for Paediatric HIV Education and Research (CIPHER) Global Cohort Collaboration, Amy L Slogrove, Michael Schomaker, Mary-Ann Davies, Paige Williams, Suna Balkan, Jihane Ben-Farhat, Nancy Calles, Kulkanya Chokephaibulkit, Charlotte Duff, Tanoh François Eboua, Adeodata Kekitiinwa-Rukyalekere, Nicola Maxwell, Jorge Pinto, George Seage, Chloe A Teasdale, Sebastian Wanless, Josiane Warszawski, Kara Wools-Kaloustian, Marcel Yotebieng, Venessa Timmerman, Intira J Collins, Ruth Goodall, Colette Smith, Kunjal Patel, Mary Paul, Diana Gibb, Rachel Vreeman, Elaine J Abrams, Rohan Hazra, Russell Van Dyke, Linda-Gail Bekker, Lynne Mofenson, Marissa Vicari, Shaffiq Essajee, Martina Penazzato, Gabriel Anabwani, Edith Q Mohapi, Peter N Kazembe, Makhosazana Hlatshwayo, Mwita Lumumba, Tessa Goetghebuer, Claire Thorne, Luisa Galli, Annemarie van Rossum, Carlo Giaquinto, Magdalena Marczynska, Laura Marques, Filipa Prata, Luminita Ene, Liubov Okhonskaia, Pablo Rojo, Claudia Fortuny, Lars Naver, Christoph Rudin, Sophie Le Coeur, Alla Volokha, Vanessa Rouzier, Regina Succi, Annette Sohn, Azar Kariminia, Andrew Edmonds, Patricia Lelo, Samuel Ayaya, Patricia Ongwen, Laura F Jefferys, Sam Phiri, Mwangelwa Mubiana-Mbewe, Shobna Sawry, Lorna Renner, Mariam Sylla, Mark J Abzug, Myron Levin, James Oleske, Miriam Chernoff, Shirley Traite, Murli Purswani, Ellen G Chadwick, Ali Judd, Valériane Leroy (2018) The epidemiology of adolescents living with perinatally acquired HIV: A cross-region global cohort analysis., PLoS medicine 15(3), Steven G. Deeks (ed.), p. e1002514, url, doi:10.1371/journal.pmed.1002514

Olga Tymejczyk, Ellen Brazier, Constantin Yiannoutsos, Kara Wools-Kaloustian, Keri Althoff, Brenda Crabtree-Ramírez, Kinh Van Nguyen, Elizabeth Zaniewski, Francois Dabis, Jean d'Amour Sinayobye, Nanina Anderegg, Nathan Ford, Radhika Wikramanayake, Denis Nash, IeDEA Collaboration (2018) HIV treatment eligibility expansion and timely antiretroviral treatment initiation following enrollment in HIV care: A metaregression analysis of programmatic data from 22 countries., PLoS medicine 15(3), Marie-Louise Newell (ed.), p. e1002534, url, doi:10.1371/journal.pmed.1002534

Jack J Olney, Jeffrey W Eaton, Paula Braitstein, Joseph W Hogan, Timothy B Hallett (2018) Optimal timing of HIV home-based counselling and testing rounds in Western Kenya., Journal of the International AIDS Society 21(6), p. e25142, url, doi:10.1002/jia2.25142

Sophie Desmonde, Franck Tanser, Rachel Vreeman, Elom Takassi, Andrew Edmonds, Pagakrong Lumbiganon, Jorge Pinto, Karen Malateste, Catherine McGowan, Azar Kariminia, Marcel Yotebieng, Fatoumata Dicko, Constantin Yiannoutsos, Mwangelwa Mubiana-Mbewe, Kara Wools-Kaloustian, Mary-Ann Davies, Valériane Leroy, International Epidemiology Databases to Evaluate AIDS (IeDEA) Pediatric Working Group (2018) Access to antiretroviral therapy in HIV-infected children aged 0-19 years in the International Epidemiology Databases to Evaluate AIDS (IeDEA) Global Cohort Consortium, 2004-2015: A prospective cohort study., PLoS medicine 15(5), Lynne Meryl Mofenson (ed.), p. e1002565, url, doi:10.1371/journal.pmed.1002565

Shibani S Mukerji, Vikas Misra, David R Lorenz, Hajime Uno, Susan Morgello, Donald Franklin, Ronald J Ellis, Scott Letendre, Dana Gabuzda (2018) Impact of Antiretroviral Regimens on CSF Viral Escape in a Prospective Multicohort Study of ART-Experienced HIV-1 Infected Adults in the United States., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, url, doi:10.1093/cid/ciy267

Kara Wools-Kaloustian, Irene Marete, Samuel Ayaya, Annette H. Sohn, Lam Van Nguyen, Shanshan Li, Valériane Leroy, Beverly S. Musick, Jamie E. Newman, Andrew Edmonds, Mary-Ann Davies, François Tanoh Eboua, Marie-Thérèse Obama, Marcel Yotebieng, Shobna Sawry, Lynne M. Mofenson, Constantin T. Yiannoutsos (2018) Time to First-Line ART Failure and Time to Second-Line ART Switch in the IeDEA Pediatric Cohort, JAIDS Journal of Acquired Immune Deficiency Syndromes, p. 1, url, doi:10.1097/QAI.0000000000001667

Angela M Parcesepe, Catrina Mugglin, Fred Nalugoda, Charlotte Bernard, Evy Yunihastuti, Keri Althoff, Antoine Jaquet, Andreas D Haas, Stephany N Duda, C William Wester, Denis Nash, International epidemiology to Evaluate AIDS (IeDEA) Consortium (2018) Screening and management of mental health and substance use disorders in HIV treatment settings in low- and middle-income countries within the global IeDEA consortium., Journal of the International AIDS Society 21(3), p. e25101, pubmed, doi:10.1002/jia2.25101

CIPHER Global Cohort Collaboration (2018) Inequality in outcomes for adolescents living with perinatally acquired HIV in sub-Saharan Africa: a Collaborative Initiative for Paediatric HIV Education and Research (CIPHER) Cohort Collaboration analysis, Journal of the International AIDS Society 21 Suppl 1, p. e25044, url, doi:10.1002/jia2.25044

Charles B Holmes, Constantin T Yiannoutsos, Batya Elul, Elizabeth Bukusi, John Ssali, Andrew Kambugu, Beverly S Musick, Craig Cohen, Carolyn Williams, Lameck Diero, Nancy Padian, Kara K Wools-Kaloustian (2018) Increased prevalence of pregnancy and comparative risk of program attrition among individuals starting HIV treatment in East Africa., PloS one 13(1), Marcel Yotebieng (ed.), p. e0190828, url, doi:10.1371/journal.pone.0190828

IeDEA and COHERE Cohort Collaborations (2018) Global Trends in CD4 Cell Count at the Start of Antiretroviral Therapy: Collaborative Study of Treatment Programs., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, pdf, doi:10.1093/cid/cix915

2017

Kate Clouse, Meridith Blevins, Mary Lou Lindegren, Marcel Yotebieng, Dung Thi Nguyen, Alfred Omondi, Denna Michael, Djimon Marcel Zannou, Gabriela Carriquiry, April Pettit, International Epidemiologic Databases to Evaluate AIDS (IeDEA) collaboration (2017) Low implementation of Xpert MTB/RIF among HIV/TB co-infected adults in the International epidemiologic Databases to Evaluate AIDS (IeDEA) program., PloS one 12(2), Madhukar Pai (ed.), p. e0171384, url, doi:10.1371/journal.pone.0171384

Cristin Q Fritz, Meridith Blevins, Mary Lou Lindegren, Kara Wools-Kaloutsian, Beverly S Musick, Morna Cornell, Kelly Goodwin, Dianne Addison, Jean Claude Dusingize, Eugène Messou, Armel Poda, Stephany N Duda, Catherine C McGowan, Matthew G Law, Richard D Moore, Aimee Freeman, Denis Nash, C William Wester (2017) Comprehensiveness of HIV care provided at global HIV treatment sites in the IeDEA consortium: 2009 and 2014., Journal of the International AIDS Society 20(1), p. 1-14, url, doi:10.7448/IAS.20.1.20933

Aggrey Semeere, Esther Freeman, Megan Wenger, David Glidden, Mwebesa Bwana, Micheal Kanyesigye, Fredrick Chite Asirwa, Elyne Rotich, Naftali Busakhala, Emmanuel Oga, Elima Jedy-Agba, Vivian Kwaghe, Kenneth Iregbu, Clement Adebamowo, Antoine Jaquet, Francois Dabis, Sam Phiri, Julia Bohlius, Matthias Egger, Constantin T Yiannoutsos, Kara Wools-Kaloustian, Jeffrey Martin (2017) Updating vital status by tracking in the community among patients with epidemic Kaposi sarcoma who are lost to follow-up in sub-Saharan Africa., BMC cancer 17(1), p. 611, pubmed, doi:10.1186/s12885-017-3549-1

Alana T Brennan, Mary-Ann Davies, Jacob Bor, Gilles Wandeler, Kathryn Stinson, Robin Wood, Hans Prozesky, Frank Tanser, Geoffrey Fatti, Andrew Boulle, Izukanji Sikazwe, Kara Wool-Kaloustian, Constantin Yuannoutsos, Valériane Leroy, Nathalie de Rekeneire, Matthew P Fox (2017) Has the phasing out of stavudine in accordance with changes in WHO guidelines led to a decrease in single-drug substitutions in first-line antiretroviral therapy for HIV in sub-Saharan Africa?, AIDS (London, England) 31(1), p. 147-157, pubmed, doi:10.1097/QAD.0000000000001307

James G Carlucci, Meridith Blevins Peratikos, Aaron M Kipp, Mary L Lindegren, Quy T Du, Lorna Renner, Gary Reubenson, John Ssali, Marcel Yotebieng, Anna M Mandalakas, Mary-Ann Davies, Marie Ballif, Lukas Fenner, April C Pettit, International Epidemiology Databases to Evaluate AIDS (IeDEA) Network (2017) Tuberculosis Treatment Outcomes Among HIV/TB-Coinfected Children in the International Epidemiology Databases to Evaluate AIDS (IeDEA) Network., Journal of acquired immune deficiency syndromes (1999) 75(2), p. 156-163, url, doi:10.1097/QAI.0000000000001335

Patrick A Coffie, Matthias Egger, Michael J Vinikoor, Marcel Zannou, Lameck Diero, Akouda Patassi, Mark H Kuniholm, Moussa Seydi, Guillaume Bado, Ponsiano Ocama, Monique I Andersson, Eugène Messou, Albert Minga, Philippa Easterbrook, Kathryn Anastos, François Dabis, Gilles Wandeler, IeDEA collaboration (2017) Trends in hepatitis B virus testing practices and management in HIV clinics across sub-Saharan Africa., BMC infectious diseases 17(Suppl 1), p. 706, url, doi:10.1186/s12879-017-2768-z

Anna Bershetyn, Thomas A Odeny, Rita Lyamuya, Alice Nakiwogga-Muwanga, Lameck Diero, Mwebesa Bwana, Paula Braitstein, Geoffrey Somi, Andrew Kambugu, Elizabeth Bukusi, Wendy Hartogensis, David V Glidden, Kara Wools-Kaloustian, Constantin Yiannoutsos, Jeffrey Martin, Elvin H Geng, East Africa International Epidemiologic Databases to Evaluate AIDS (EA-IeDEA) Consortium (2017) The Causal Effect of Tracing by Peer Health Workers on Return to Clinic Among Patients Who Were Lost to Follow-up From Antiretroviral Therapy in Eastern Africa: A "Natural Experiment" Arising From Surveillance of Lost Patients., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 64(11), p. 1547-1554, url, doi:10.1093/cid/cix191

Mosa Moshabela, Dominic Bukenya, Gabriel Darong, Joyce Wamoyi, Estelle McLean, Morten Skovdal, William Ddaaki, Kenneth Ondeng'e, Oliver Bonnington, Janet Seeley, Victoria Hosegood, Alison Wringe (2017) Traditional healers, faith healers and medical practitioners: the contribution of medical pluralism to bottlenecks along the cascade of care for HIV/AIDS in Eastern and Southern Africa., Sexually transmitted infections 93(Suppl 3), p. e052974, url, doi:10.1136/sextrans-2016-052974

Ken Ondenge, Jenny Renju, Oliver Bonnington, Mosa Moshabela, Joyce Wamoyi, Constance Nyamukapa, Janet Seeley, Alison Wringe, Morten Skovdal (2017) 'I am treated well if I adhere to my HIV medication': putting patient-provider interactions in context through insights from qualitative research in five sub-Saharan African countries., Sexually transmitted infections 93(Suppl 3), p. e052973, url, doi:10.1136/sextrans-2016-052973

Dominic Bukenya, Alison Wringe, Mosa Moshabela, Morten Skovdal, Robert Ssekubugu, Sara Paparini, Jenny Renju, Estelle McLean, Oliver Bonnington, Joyce Wamoyi, Janet Seeley (2017) Where are we now? A multicountry qualitative study to explore access to pre-antiretroviral care services: a precursor to antiretroviral therapy initiation., Sexually transmitted infections 93(Suppl 3), p. e052970, url, doi:10.1136/sextrans-2016-052970

Alison Wringe, Mosa Moshabela, Constance Nyamukapa, Dominic Bukenya, Ken Ondenge, William Ddaaki, Joyce Wamoyi, Janet Seeley, Kathryn Church, Basia Zaba, Victoria Hosegood, Oliver Bonnington, Morten Skovdal, Jenny Renju (2017) HIV testing experiences and their implications for patient engagement with HIV care and treatment on the eve of 'test and treat': findings from a multicountry qualitative study., Sexually transmitted infections 93(Suppl 3), p. e052969, url, doi:10.1136/sextrans-2016-052969

Joyce Wamoyi, Jenny Renju, Mosa Moshabela, Estelle McLean, Daniel Nyato, Doris Mbata, Oliver Bonnington, Janet Seeley, Kathryn Church, Basia Zaba, Alison Wringe (2017) Understanding the relationship between couple dynamics and engagement with HIV care services: insights from a qualitative study in Eastern and Southern Africa., Sexually transmitted infections 93(Suppl 3), p. e052976, url, doi:10.1136/sextrans-2016-052976

Morten Skovdal, Alison Wringe, Janet Seeley, Jenny Renju, Sara Paparini, Joyce Wamoyi, Mosa Moshabela, William Ddaaki, Constance Nyamukapa, Kenneth Ondenge, Sarah Bernays, Oliver Bonnington (2017) Using theories of practice to understand HIV-positive persons varied engagement with HIV services: a qualitative study in six Sub-Saharan African countries., Sexually transmitted infections 93(Suppl 3), p. e052977, url, doi:10.1136/sextrans-2016-052977

Jenny Renju, Mosa Moshabela, Estelle McLean, William Ddaaki, Morten Skovdal, Fred Odongo, Dominic Bukenya, Joyce Wamoyi, Oliver Bonnington, Janet Seeley, Basia Zaba, Alison Wringe (2017) 'Side effects' are 'central effects' that challenge retention in HIV treatment programmes in six sub-Saharan African countries: a multicountry qualitative study., Sexually transmitted infections 93(Suppl 3), p. e052971, url, doi:10.1136/sextrans-2016-052971

O Bonnington, J Wamoyi, W Ddaaki, D Bukenya, K Ondenge, M Skovdal, J Renju, M Moshabela, A Wringe (2017) Changing forms of HIV-related stigma along the HIV care and treatment continuum in sub-Saharan Africa: a temporal analysis., Sexually transmitted infections 93(Suppl 3), p. e052975, url, doi:10.1136/sextrans-2016-052975

IeDEA Pediatric Working Group (2017) Taking a critical look at the UNAIDS global estimates on paediatric and adolescent HIV survival and death., Journal of the International AIDS Society 20(1), p. 21952, url, doi:10.7448/IAS.20.1.21952

Giorgos Bakoyannis, Menggang Yu, Constantin T Yiannoutsos (2017) Semiparametric regression on cumulative incidence function with interval-censored competing risks data., Statistics in medicine 36(23), p. 3683-3707, url, doi:10.1002/sim.7350

Nanina Anderegg, Leigh F Johnson, Elizabeth Zaniewski, Keri N Althoff, Eric Balestre, Matthew Law, Denis Nash, Bryan E Shepherd, Constantin T Yiannoutsos, Matthias Egger, IeDEA, MeSH consortia (2017) All-cause mortality in HIV-positive adults starting combination antiretroviral therapy: correcting for loss to follow-up., AIDS (London, England) 31 Suppl 1, p. S31-S40, pubmed, doi:10.1097/QAD.0000000000001321

Peter F Rebeiro, Giorgos Bakoyannis, Beverly S Musick, Ronald S Braithwaite, Kara K Wools-Kaloustian, Winstone Nyandiko, Fatma Some, Paula Braitstein, Constantin T Yiannoutsos (2017) Observational Study of the Effect of Patient Outreach on Return to Care: The Earlier the Better., Journal of acquired immune deficiency syndromes (1999) 76(2), p. 141-148, pubmed, doi:10.1097/QAI.0000000000001474

Mary Mahy, Martina Penazzato, Andrea Ciaranello, Lynne Mofenson, Constantin T Yianoutsos, Mary-Ann Davies, John Stover (2017) Improving estimates of children living with HIV from the Spectrum AIDS Impact Model., AIDS (London, England) 31 Suppl 1, p. S13-S22, url, doi:10.1097/QAD.0000000000001306

Constantin T Yiannoutsos, Kara K Wools-Kaloustian, Beverly S Musick, Batya Elul (2017) Rejoinder to "Lost Opportunities Concerning Loss-to-Follow-Up: A Response to Elul et al." by Strassle and colleagues., Journal of acquired immune deficiency syndromes (1999) 75(2), p. e56-e57, url, doi:10.1097/QAI.0000000000001353

Steven A Brown, Salma Abbas, Mary-Ann Davies, Torsak Bunupuradah, Annette H Sohn, Karl-Günter Technau, Lorna Renner, Valériane Leroy, Andrew Edmonds, Marcel Yotebieng, Catherine C McGowan, Stephany N Duda, Lynne Mofenson, Beverly Musick, Kara Wools-Kaloustian (2017) Pediatric Cancer Burden and Treatment Resources within the Pediatric IeDEA Consortium., Journal of acquired immune deficiency syndromes (1999), p. 1, url, doi:10.1097/QAI.0000000000001453

2016

Jenell S Coleman, Michelle S Cespedes, Susan Cu-Uvin, Rose J Kosgei, May Maloba, Jean Anderson, Timothy Wilkin, Antoine Jaquet, Julia Bohlius, Kathryn Anastos, Kara Wools-Kaloustian (2016) An Insight Into Cervical Cancer Screening and Treatment Capacity in Sub Saharan Africa., Journal of lower genital tract disease 20(1), p. 31-7, url, doi:10.1097/LGT.0000000000000165

M Katherine Charles, Mary Lou Lindegren, C William Wester, Meridith Blevins, Timothy R Sterling, Nguyen Thi Dung, Jean Claude Dusingize, Divine Avit-Edi, Nicolas Durier, Barbara Castelnuovo, Gertrude Nakigozi, Claudia P Cortes, Marie Ballif, Lukas Fenner, International epidemiology Databases to Evaluate AIDS (IeDEA) Collaboration (2016) Implementation of Tuberculosis Intensive Case Finding, Isoniazid Preventive Therapy, and Infection Control ("Three I's") and HIV-Tuberculosis Service Integration in Lower Income Countries., PloS one 11(4), Juraj Ivanyi (ed.), p. e0153243, url, doi:10.1371/journal.pone.0153243

Esther Freeman, Aggrey Semeere, Megan Wenger, Mwebesa Bwana, F Chite Asirwa, Naftali Busakhala, Emmanuel Oga, Elima Jedy-Agba, Vivian Kwaghe, Kenneth Iregbu, Antoine Jaquet, Francois Dabis, Habakkuk Azinyui Yumo, Jean Claude Dusingize, David Bangsberg, Kathryn Anastos, Sam Phiri, Julia Bohlius, Matthias Egger, Constantin Yiannoutsos, Kara Wools-Kaloustian, Jeffrey Martin (2016) Pitfalls of practicing cancer epidemiology in resource-limited settings: the case of survival and loss to follow-up after a diagnosis of Kaposi's sarcoma in five countries across sub-Saharan Africa., BMC cancer 16(1), p. 65, url, doi:10.1186/s12885-016-2080-0

Beth Rachlis, Rakhi Karwa, Celia Chema, Sonak Pastakia, Sten Olsson, Kara Wools-Kaloustian, Beatrice Jakait, Mercy Maina, Marcel Yotebieng, Nagalingeswaran Kumarasamy, Aimee Freeman, Nathalie de Rekeneire, Stephany N Duda, Mary-Ann Davies, Paula Braitstein (2016) Targeted Spontaneous Reporting: Assessing Opportunities to Conduct Routine Pharmacovigilance for Antiretroviral Treatment on an International Scale., Drug safety 39(10), p. 959-76, url, doi:10.1007/s40264-016-0434-9

Linh Tran, Constantin T Yiannoutsos, Beverly S Musick, Kara K Wools-Kaloustian, Abraham Siika, Sylvester Kimaiyo, Mark J van der Laan, Maya Petersen (2016) Evaluating the Impact of a HIV Low-Risk Express Care Task-Shifting Program: A Case Study of the Targeted Learning Roadmap., Epidemiologic methods 5(1), p. 69-91, url, doi:10.1515/em-2016-0004

Elvin H Geng, Thomas A Odeny, Rita Lyamuya, Alice Nakiwogga-Muwanga, Lameck Diero, Mwebesa Bwana, Paula Braitstein, Geoffrey Somi, Andrew Kambugu, Elizabeth Bukusi, Megan Wenger, Torsten B Neilands, David V Glidden, Kara Wools-Kaloustian, Constantin Yiannoutsos, Jeffrey Martin (2016) Retention in Care and Patient-Reported Reasons for Undocumented Transfer or Stopping Care Among HIV-Infected Patients on Antiretroviral Therapy in Eastern Africa: Application of a Sampling-Based Approach., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 62(7), p. 935-944, url, doi:10.1093/cid/civ1004

Erin Amerson, Carina Martin Woodruff, Amy Forrestel, Megan Wenger, Timothy McCalmont, Philip LeBoit, Toby Maurer, Miriam Laker-Oketta, Winnie Muyindike, Mwebesa Bwana, Nathan Buziba, Naftali Busakhala, Kara Wools-Kaloustian, Jeffrey Martin (2016) Accuracy of Clinical Suspicion and Pathologic Diagnosis of Kaposi Sarcoma in East Africa., Journal of acquired immune deficiency syndromes (1999) 71(3), p. 295-301, url, doi:10.1097/QAI.0000000000000862

Annabelle Gourlay, Alison Wringe, Jim Todd, Caoimhe Cawley, Denna Michael, Richard Machemba, Benjamin Clark, Clemens Masesa, Milly Marston, Mark Urassa, Basia Zaba (2016) Uptake of services for prevention of mother-to-child transmission of HIV in a community cohort in rural Tanzania from 2005 to 2012., BMC health services research 16(1), p. 4, url, doi:10.1186/s12913-015-1249-6

Carol S Camlin, Torsten B Neilands, Thomas A Odeny, Rita Lyamuya, Alice Nakiwogga-Muwanga, Lameck Diero, Mwebesa Bwana, Paula Braitstein, Geoffrey Somi, Andrew Kambugu, Elizabeth A Bukusi, David V Glidden, Kara K Wools-Kaloustian, Megan Wenger, Elvin H Geng, East Africa International Epidemiologic Databases to Evaluate AIDS (EA-IeDEA) Consortium (2016) Patient-reported factors associated with reengagement among HIV-infected patients disengaged from care in East Africa., AIDS (London, England) 30(3), p. 495-502, url, doi:10.1097/QAD.0000000000000931

Aggrey Semeere, Megan Wenger, Naftali Busakhala, Nathan Buziba, Mwebesa Bwana, Winnie Muyindike, Erin Amerson, Toby Maurer, Timothy McCalmont, Philip LeBoit, Beverly Musick, Constantin Yiannoutsos, Robert Lukande, Barbara Castelnuovo, Miriam Laker-Oketta, Andrew Kambugu, David Glidden, Kara Wools-Kaloustian, Jeffrey Martin (2016) A prospective ascertainment of cancer incidence in sub-Saharan Africa: The case of Kaposi sarcoma., Cancer medicine 5(5), p. 914-28, url, doi:10.1002/cam4.618

Paola Rebora, Laura Antolini, David V Glidden, Maria Grazia Valsecchi (2016) Crude incidence in two-phase designs in the presence of competing risks., BMC medical research methodology 16(1), p. 5, url, doi:10.1186/s12874-015-0103-1

Suzue Saito, Philani Mpofu, E Jane Carter, Lameck Diero, Kara K Wools-Kaloustian, Constantin T Yiannoutsos, Musick S Beverly, Simon Tsiouris, Geoffrey R Somi, John Ssali, Denis Nash, Batya Elul (2016) Implementation and Operational Research: Declining Tuberculosis Incidence Among People Receiving HIV Care and Treatment Services in East Africa, 2007-2012., Journal of acquired immune deficiency syndromes (1999) 71(4), p. e96-e106, url, doi:10.1097/QAI.0000000000000896

Batya Elul, Kara K Wools-Kaloustian, Yingfeng Wu, Beverly S Musick, Harriet Nuwagaba-Biribonwoha, Denis Nash, Samuel Ayaya, Elizabeth Bukusi, Pius Okong, Juliana Otieno, Deo Wabwire, Andrew Kambugu, Constantin T Yiannoutsos (2016) Untangling the Relationship Between Antiretroviral Therapy Use and Incident Pregnancy: A Marginal Structural Model Analysis Using Data From 47,313 HIV-Positive Women in East Africa., Journal of acquired immune deficiency syndromes (1999) 72(3), p. 324-32, url, doi:10.1097/QAI.0000000000000963

Damalie Nakanjako, Agnes N Kiragga, Beverly S Musick, Constantin T Yiannoutsos, Kara Wools-Kaloustian, Lameck Diero, Patrick Oyaro, Emanuel Lugina, John C Ssali, Andrew Kambugu, Philippa Easterbrook (2016) Frequency and impact of suboptimal immune recovery on first-line antiretroviral therapy within the International Epidemiologic Databases to Evaluate AIDS in East Africa., AIDS (London, England) 30(12), p. 1913-22, url, doi:10.1097/QAD.0000000000001085

Beth Rachlis, Giorgos Bakoyannis, Philippa Easterbrook, Becky Genberg, Ronald Scott Braithwaite, Craig R Cohen, Elizabeth A Bukusi, Andrew Kambugu, Mwebesa Bosco Bwana, Geoffrey R Somi, Elvin H Geng, Beverly Musick, Constantin T Yiannoutsos, Kara Wools-Kaloustian, Paula Braitstein (2016) Facility-Level Factors Influencing Retention of Patients in HIV Care in East Africa., PloS one 11(8), Graciela Andrei (ed.), p. e0159994, url, doi:10.1371/journal.pone.0159994

Jack J Olney, Paula Braitstein, Jeffrey W Eaton, Edwin Sang, Monicah Nyambura, Sylvester Kimaiyo, Ellen McRobie, Joseph W Hogan, Timothy B Hallett (2016) Evaluating strategies to improve HIV care outcomes in Kenya: a modelling study., The lancet. HIV 3(12), p. e592-e600, url, doi:10.1016/S2352-3018(16)30120-5

2015

Marie Ballif, Lorna Renner, Jean Claude Dusingize, Valeriane Leroy, Samuel Ayaya, Kara Wools-Kaloustian, Claudia P Cortes, Catherine C McGowan, Claire Graber, Anna M Mandalakas, Lynne M Mofenson, Matthias Egger, Ketut Dewi Kumara Wati, Revathy Nallusamy, Gary Reubenson, Mary-Ann M.-A. Davies, Lukas Fenner, International Epidemiologic Databases to Evaluate AIDS (IeDEA), S. International Epidemiologic Databases to Evaluate AIDS IeDEA, K. Anastos, Marie Ballif, J. Bashi, W. Bishai, A. Boulle, P. Braitstein, G. Carriquiry, J. E. Carter, P. Cegielski, C. Chimbetete, J. Conrad, Claudia P Cortes, Mary-Ann M.-A. Davies, L. Diero, S. Duda, N. Durier, J. C. Dusingize, Matthias Egger, T. F. Eboua, Lukas Fenner, A. Gasser, E. Geng, J. C. Gnokori, L. Hardwicke, C. Hoffmann, R. Huebner, N. Kancheya, S. Kiertiburanakul, P. Kim, D. Lameck, Valeriane Leroy, C. Lewden, M. L. Lindegren, Anna M Mandalakas, M. Maskew, R. McKaig, Lynne M Mofenson, M. Mpoudi-Etame, B. Okwara, S. Phiri, W. Prasitsuebsai, A. Petit, H. Prozesky, S. E. Reid, Lorna Renner, Gary Reubenson, A. Sohn, T. Sterling, Q. Vo, D. Walker, F. Wehbe, C. Wejse, W. Wester, C. Williams, R. Wood, Kara Wools-Kaloustian, Z. Yao, E. Yunihastuti, E. Abrams, J. Ananworanich, K. Anastos, A. Azondekon, M. B. Frieda Behets, A. Boulle, P. Braitstein, P. Cahn, C. Cesar, A. Ciaranello, J. Conrad, F. Dabis, Mary-Ann M.-A. Davies, A. Edmonds, Matthias Egger, L. Feinstein, Claire Graber, L. Hardwicke, R. Hazra, D. Hoover, R. Huebner, O. Keiser, Valeriane Leroy, M. L. Lindegren, M. C. Magneres, Catherine C McGowan, R. McKaig, L. Messerschmidt, Lynne M Mofenson, M. Mpoudi-Etame, H. N. Biribonwoha, G. Sharp, A. Sohn, Q. Vo, R. Vreeman, D. Walker, F. Wehbe, W. Wester, C. Williams, Kara Wools-Kaloustian, C. Worrell, C. Yiannoutsos, B. Zwickl (2015) Tuberculosis in Pediatric Antiretroviral Therapy Programs in Low- and Middle-Income Countries: Diagnosis and Screening Practices., Journal of the Pediatric Infectious Diseases Society 4(1), p. 30-8, url, doi:10.1093/jpids/piu020

Andrea L Ciaranello, Kathleen Doherty, Martina Penazzato, Jane C Lindsey, Linda Harrison, Kathleen Kelly, Rochelle P Walensky, Shaffiq Essajee, Elena Losina, Lulu Muhe, Kara Wools-Kaloustian, Samuel Ayaya, Milton C Weinstein, Paul Palumbo, Kenneth A Freedberg (2015) Cost-effectiveness of first-line antiretroviral therapy for HIV-infected African children less than 3 years of age., AIDS (London, England) 29(10), p. 1247-59, url, doi:10.1097/QAD.0000000000000672

Diana Huisin ʼt Veld, Eric Balestre, Jozefien Buyze, Joris Menten, Antoine Jaquet, David A Cooper, Francois Dabis, Constantin T Yiannoutsos, Lameck Diero, Portia Mutevedzi, Matthew P Fox, Eugene Messou, Christopher J Hoffmann, Hans W Prozesky, Matthias Egger, Jennifer J Hemingway-Foday, Robert Colebunders, International Epidemiologic Databases to Evaluate AIDS (IeDEA) (2015) Determinants of Weight Evolution Among HIV-Positive Patients Initiating Antiretroviral Treatment in Low-Resource Settings., Journal of acquired immune deficiency syndromes (1999) 70(2), p. 146-54, url, doi:10.1097/QAI.0000000000000691

Andreas D Haas, Olivia Keiser, Eric Balestre, Steve Brown, Emmanuel Bissagnene, Cleophas Chimbetete, François Dabis, Mary-Ann Davies, Christopher J Hoffmann, Patrick Oyaro, Rosalind Parkes-Ratanshi, Steven J Reynolds, Izukanji Sikazwe, Kara Wools-Kaloustian, D Marcel Zannou, Gilles Wandeler, Matthias Egger, IeDEA southern Africa, east Africa, and west Africa (2015) Monitoring and switching of first-line antiretroviral therapy in adult treatment cohorts in sub-Saharan Africa: collaborative analysis., The lancet. HIV 2(7), p. e271-8, url, doi:10.1016/S2352-3018(15)00087-9

Elvin H Geng, Torsten B Neilands, Rodolphe Thièbaut, Mwebesa Bosco Bwana, Denis Nash, Richard D Moore, Robin Wood, Djimon Marcel Zannou, Keri N Althoff, Poh Lian Lim, Jean B Nachega, Philippa J Easterbrook, Andrew Kambugu, Francesca Little, Gertrude Nakigozi, Damalie Nakanjako, Valerian Kiggundu, Patrick Chung Ki Li, David R Bangsberg, Matthew P Fox, HansW Prozesky, Peter W Hunt, Mary-Ann Davies, Steven J Reynolds, Matthias Egger, Constantin T Yiannoutsos, Eric V Vittinghoff, Steven G Deeks, Jeffrey N Martin (2015) CD41 T cell recovery during suppression of HIV replication: an international comparison of the immunological efficacy of antiretroviral therapy in North America, Asia and Africa., International journal of epidemiology 44(1), p. 251-63, pubmed

Manuel Koller, Kunjal Patel, Benjamin H Chi, Kara Wools-Kaloustian, Fatoumata Dicko, Kulkanya Chokephaibulkit, Cleophas Chimbetete, Dorita Avila, Rohan Hazra, Samual Ayaya, Valeriane Leroy, Huu Khanh Truong, Matthias Egger, Mary-Ann Davies, IeDEA, NISDI, PHACS and IMPAACT 219C studies (2015) Immunodeficiency in children starting antiretroviral therapy in low-, middle-, and high-income countries., Journal of acquired immune deficiency syndromes (1999) 68(1), p. 62-72, url, doi:10.1097/QAI.0000000000000380

Manuel Koller, Kunjal Patel, Benjamin H Chi, Kara Wools-Kaloustian, Fatoumata Dicko, Kulkanya Chokephaibulkit, Cleophas Chimbetete, Rohan Hazra, Samual Ayaya, Valeriane Leroy, Huu Khanh Trong, Matthias Egger, Mary-Ann Davies, IeDEA, NISDI, PHACS and IMPAACT 219C Studies (2015) Authors' Reply: Early Initiation of Antiretroviral Therapy Among Young Children: A Long Way to Go., Journal of acquired immune deficiency syndromes (1999) 70(2), p. e71-2, url, doi:10.1097/QAI.0000000000000773

Annabelle Gourlay, Alison Wringe, Jim Todd, Denna Michael, Georges Reniers, Mark Urassa, Prosper Njau, Deborah Kajoka, Levina Lema, Basia Zaba (2015) Challenges with routine data sources for PMTCT programme monitoring in East Africa: insights from Tanzania, Global Health Action 8(1), p. 29987, url, doi:10.3402/gha.v8.29987

Becky L Genberg, Violet Naanyu, Juddy Wachira, Joseph W Hogan, Edwin Sang, Monicah Nyambura, Michael Odawa, Corey Duefield, Samson Ndege, Paula Braitstein (2015) Linkage to and engagement in HIV care in western Kenya: an observational study using population-based estimates from home-based counselling and testing., The lancet. HIV 2(1), p. e20-6, pubmed, doi:10.1016/S2352-3018(14)00034-4

Elvin H Geng, Thomas A Odeny, Rita E Lyamuya, Alice Nakiwogga-Muwanga, Lameck Diero, Mwebesa Bwana, Winnie Muyindike, Paula Braitstein, Geoffrey R Somi, Andrew Kambugu, Elizabeth A Bukusi, Megan Wenger, Kara K Wools-Kaloustian, David V Glidden, Constantin T Yiannoutsos, Jeffrey Martin (2015) Estimation of Mortality among HIV-infected people on antiretroviral therapy treatment in east Africa: a sampling based approach in an observational, multisite, cohort study., The lancet. HIV 2(3), p. e107-e116, pubmed, doi:10.1016/S2352-3018(15)00002-8

Menggang Yu, Constantin T Yiannoutsos (2015) Marginal and Conditional Distribution Estimation from Double-Sampled Semi-Competing Risks Data., Scandinavian journal of statistics, theory and applications 42(1), p. 87-103, pubmed, doi:10.1111/sjos.12096

Rodrigo Cerda, Freddy Perez, Rosa Maria S M Domingues, Paula M Luz, Beatriz Grinsztejn, Valdilea G Veloso, Sonja Caffe, Jordan A Francke, Kenneth A Freedberg, Andrea L Ciaranello (2015) Prenatal Transmission of Syphilis and Human Immunodeficiency Virus in Brazil: Achieving Regional Targets for Elimination., Open forum infectious diseases 2(2), p. ofv073, url, doi:10.1093/ofid/ofv073

A K Forrestel, A Naujokas, J N Martin, T A Maurer, T H McCalmont, M O Laker-Opwonya, G Mulyowa, N Busakhala, Erin H Amerson (2015) Bacillary angiomatosis masquerading as Kaposi's sarcoma in East Africa., Journal of the International Association of Providers of AIDS Care 14(1), p. 21-5, url, doi:10.1177/2325957414521497

Manuel Koller, Keri N Althoff, Mary-Ann Davies, Matthias Egger (2015) Authors' reply: immunodeficiency at the start of combination antiretroviral therapy: steady improvement or step changes?, Journal of acquired immune deficiency syndromes (1999) 68(1), p. e16-7, url, doi:10.1097/QAI.0000000000000399

Beth Rachlis, Daniel Ochieng, Elvin Geng, Elyne Rotich, Vincent Ochieng, Beryl Maritim, Samson Ndege, Violet Naanyu, Jeffrey N Martin, Alfred Keter, Paul Ayuo, Lameck Diero, Monicah Nyambura, Paula Braitstein (2015) Implementation and operational research: evaluating outcomes of patients lost to follow-up in a large comprehensive care treatment program in western Kenya., Journal of acquired immune deficiency syndromes (1999) 68(4), p. e46-55, url, doi:10.1097/QAI.0000000000000492

Miriam O Laker-Oketta, Megan Wenger, Aggrey Semeere, Barbara Castelnuovo, Andrew Kambugu, Robert Lukande, F Chite Asirwa, Naftali Busakhala, Nathan Buziba, Lameck Diero, Kara Wools-Kaloustian, Robert Matthew Strother, Mwebesa Bwana, Winnie Muyindike, Erin Amerson, Edward Mbidde, Toby Maurer, Jeffrey Martin (2015) Task Shifting and Skin Punch for the Histologic Diagnosis of Kaposi's Sarcoma in Sub-Saharan Africa: A Public Health Solution to a Public Health Problem., Oncology 89(1), p. 60-5, url, doi:10.1159/000375165

Marcel Yotebieng, Tammy Meyers, Frieda Behets, Mary-Ann Davies, Olivia Keiser, Kapella Zacharia Ngonyani, Rita E Lyamuya, Azar Kariminia, Rawiwan Hansudewechakul, Valeriane Leroy, Sikiratou Koumakpai, Jamie Newman, Annelies Van Rie (2015) Age-specific and sex-specific weight gain norms to monitor antiretroviral therapy in children in low-income and middle-income countries., AIDS (London, England) 29(1), p. 101-9, url, doi:10.1097/QAD.0000000000000506

Annabelle Gourlay, Alison Wringe, Jim Todd, Caoimhe Cawley, Denna Michael, Richard Machemba, Georges Reniers, Mark Urassa, Basia Zaba (2015) Factors associated with uptake of services to prevent mother-to-child transmission of HIV in a community cohort in rural Tanzania., Sexually transmitted infections 91(7), p. 520-7, url, doi:10.1136/sextrans-2014-051907

Andrea L Ciaranello, Landon Myer, Kathleen Kelly, Sarah Christensen, Kristen Daskilewicz, Katie Doherty, Linda-Gail Bekker, Taige Hou, Robin Wood, Jordan A Francke, Kara Wools-Kaloustian, Kenneth A Freedberg, Rochelle P Walensky (2015) Point-of-care CD4 testing to inform selection of antiretroviral medications in south african antenatal clinics: a cost-effectiveness analysis., PloS one 10(3), Ravi Jhaveri (ed.), p. e0117751, url, doi:10.1371/journal.pone.0117751

Helen Byakwaga, Peter W Hunt, Miriam Laker-Oketta, David V Glidden, Yong Huang, Bosco M Bwana, A Rain Mocello, John Bennett, Victoria Walusansa, Sheila C Dollard, David R Bangsberg, Edward K Mbidde, Jeffrey N Martin (2015) The Kynurenine Pathway of Tryptophan Catabolism and AIDS-Associated Kaposi Sarcoma in Africa., Journal of acquired immune deficiency syndromes (1999) 70(3), p. 296-303, url, doi:10.1097/QAI.0000000000000747

Giorgos Bakoyannis, Constantin T Yiannoutsos (2015) Impact of and Correction for Outcome Misclassification in Cumulative Incidence Estimation., PloS one 10(9), Antonio Guilherme Pacheco (ed.), p. e0137454, url, doi:10.1371/journal.pone.0137454

2014

Maya Petersen, Constantin T Yiannoutsos, Amy Justice, Matthias Egger (2014) Observational research on NCDs in HIV-positive populations: conceptual and methodological considerations., Journal of acquired immune deficiency syndromes (1999) 67 Suppl 1, p. S8-16, url, doi:10.1097/QAI.0000000000000253

M Ballif, V Nhandu, R Wood, J C Dusingize, E J Carter, C P Cortes, C C McGowan, L Diero, C Graber, L Renner, D Hawerlander, S Kiertiburanakul, Q T Du, T R Sterling, M Egger, L Fenner, International epidemiological Databases to Evaluate AIDS (IeDEA) (2014) Detection and management of drug-resistant tuberculosis in HIV-infected patients in lower-income countries., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 18(11), p. 1327-36, url, doi:10.5588/ijtld.14.0106

Matthias IeDEA and ART Cohort Collaborations, Dorita Avila, Keri N Althoff, Catrina Mugglin, Kara Wools-Kaloustian, Manuel Koller, François Dabis, Denis Nash, Thomas Gsponer, Somnuek Sungkanuparph, Catherine McGowan, Margaret May, David Cooper, Cleophas Chimbetete, Marcelo Wolff, Ann Collier, Hamish McManus, Mary-Ann Davies, Dominique Costagliola, Brenda Crabtree-Ramirez, Romanee Chaiwarith, Angela Cescon, Morna Cornell, Lameck Diero, Praphan Phanuphak, Adrien Sawadogo, Jochen Ehmer, Serge P Eholie, Patrick C K Li, Matthew P Fox, Neel R Gandhi, Elsa González, Christopher K C Lee, Christopher J Hoffmann, Andrew Kambugu, Olivia Keiser, Rossana Ditangco, Hans Prozesky, Fiona Lampe, Nagalingeswaran Kumarasamy, Mari Kitahata, Emmanuel Lugina, Rita Lyamuya, Saphonn Vonthanak, Valeria Fink, Antonella d'Arminio Monforte, Paula Mendes Luz, Yi-Ming A Chen, Albert Minga, Jordi Casabona, Albert Mwango, Jun Y Choi, Marie-Louise Newell, Elizabeth A Bukusi, Kapella Ngonyani, Tuti P Merati, Juliana Otieno, Mwebesa B Bosco, Sam Phiri, Oon T Ng, Kathryn Anastos, Jürgen Rockstroh, Ignacio Santos, Shinichi Oka, Geoffrey Somi, Christoph Stephan, Ramon Teira, Deo Wabwire, Gilles Wandeler, Andrew Boulle, Peter Reiss, Robin Wood, Benjamin H Chi, Carolyn Williams, Jonathan A Sterne, Matthias Egger (2014) Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries., Journal of acquired immune deficiency syndromes (1999) 65(1), p. e8-16, url, doi:10.1097/QAI.0b013e3182a39979

Stephany N Duda, Amanda M Farr, Mary Lou Lindegren, Meridith Blevins, C William Wester, Kara Wools-Kaloustian, Didier K Ekouevi, Matthias Egger, Jennifer Hemingway-Foday, David A Cooper, Richard D Moore, Catherine C McGowan, Denis Nash, International Epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration (2014) Characteristics and comprehensiveness of adult HIV care and treatment programmes in Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaborati, Journal of the International AIDS Society 17(1), p. 19045, pubmed, doi:10.7448/IAS.17.1.19045

Andrea Ciaranello, Zhigang Lu, Samuel Ayaya, Elena Losina, Beverly Musick, Rachel Vreeman, Kenneth A Freedberg, Elaine J Abrams, Lisa Dillabaugh, Katie Doherty, John Ssali, Constantin T Yiannoutsos, Kara Wools-Kaloustian (2014) Incidence of World Health Organization stage 3 and 4 events, tuberculosis and mortality in untreated, HIV-infected children enrolling in care before 1 year of age: an IeDEA (International Epidemiologic Databases To Evaluate AIDS) East Africa regional anal, The Pediatric infectious disease journal 33(6), p. 623-9, url, doi:10.1097/INF.0000000000000223

Ming-Wen An, Constantine E Frangakis, Constantin T Yiannoutsos (2014) Choosing profile double-sampling designs for survival estimation with application to President's Emergency Plan for AIDS Relief evaluation., Statistics in medicine 33(12), p. 2017-29, url, doi:10.1002/sim.6087

Ronald Scott Braithwaite, Kimberly A Nucifora, Christopher Toohey, Jason Kessler, Lauren M Uhler, Sherry M Mentor, Daniel Keebler, Timothy Hallett (2014) How do different eligibility guidelines for antiretroviral therapy affect the cost-effectiveness of routine viral load testing in sub-Saharan Africa?, AIDS (London, England) 28 Suppl 1, p. S73-83, url, doi:10.1097/QAD.0000000000000110

Annabelle Gourlay, Gerry Mshana, Isolde Birdthistle, Grace Bulugu, Basia Zaba, Mark Urassa (2014) Using vignettes in qualitative research to explore barriers and facilitating factors to the uptake of prevention of mother-to-child transmission services in rural Tanzania: a critical analysis., BMC medical research methodology 14(1), p. 21, url, doi:10.1186/1471-2288-14-21

Agnes N Kiragga, Judith J Lok, Beverly S Musick, Ronald J Bosch, Ann Mwangi, Kara K Wools-Kaloustian, Constantin T Yiannoutsos, East Africa IeDEA Regional Consortium (2014) CD4 trajectory adjusting for dropout among HIV-positive patients receiving combination antiretroviral therapy in an East African HIV care centre., Journal of the International AIDS Society 17, p. 18957, pubmed

Maya L Petersen, Linh Tran, Elvin H Geng, Steven J Reynolds, Andrew Kambugu, Robin Wood, David R Bangsberg, Constantin T Yiannoutsos, Steven G Deeks, Jeffrey N Martin (2014) Delayed switch of antiretroviral therapy after virologic failure associated with elevated mortality among HIV-infected adults in Africa., AIDS (London, England) 28(14), p. 2097-107, pubmed, doi:10.1097/QAD.0000000000000349

Alexander J Lankowski, Alexander C Tsai, Michael Kanyesigye, Mwebesa Bwana, Jessica E Haberer, Megan Wenger, Jeffrey N Martin, David R Bangsberg, Peter W Hunt, Mark J Siedner (2014) Empiric deworming and CD4 count recovery in HIV-infected Ugandans initiating antiretroviral therapy., PLoS neglected tropical diseases 8(8), Judd L. Walson (ed.), p. e3036, url, doi:10.1371/journal.pntd.0003036

Annabelle Gourlay, Alison Wringe, Isolde Birdthistle, Gerry Mshana, Denna Michael, Mark Urassa (2014) "It is like that, we didn't understand each other": exploring the influence of patient-provider interactions on prevention of mother-to-child transmission of HIV service use in rural Tanzania., PloS one 9(9), Nathan Maclyn Thielman (ed.), p. e106325, url, doi:10.1371/journal.pone.0106325

2013

Paul Ayuo, Beverly Musick, Hai Liu, Paula Braitstein, Winstone Nyandiko, Boaz Otieno-Nyunya, Adrian Gardner, Kara Wools-Kaloustian (2013) Frequency and factors associated with adherence to and completion of combination antiretroviral therapy for prevention of mother to child transmission in western Kenya, Journal of the International AIDS Society 16(1), p. 17994, url, doi:10.7448/IAS.16.1.17994

Lukas Fenner, Marie Ballif, Claire Graber, Venerandah Nhandu, Jean Claude Dusingize, Claudia P Cortes, Gabriela Carriquiry, Kathryn Anastos, Daniela Garone, Eefje Jong, Joachim Charles Gnokoro, Omar Sued, Samuel Ajayi, Lameck Diero, Kara Wools-Kaloustian, Sasisopin Kiertiburanakul, Barbara Castelnuovo, Charlotte Lewden, Nicolas Durier, Timothy R Sterling, Matthias Egger, International epidemiological Databases to Evaluate AIDS (IeDEA) (2013) Tuberculosis in antiretroviral treatment programs in lower income countries: availability and use of diagnostics and screening., PloS one 8(10), Pere-Joan Cardona (ed.), p. e77697, url, doi:10.1371/journal.pone.0077697

Marita Mann, Mark N Lurie, Sylvester Kimaiyo, Rami Kantor (2013) Effects of political conflict-induced treatment interruptions on HIV drug resistance., AIDS reviews 15(1), p. 15-24, pubmed

Abraham M Siika, Constantin T Yiannoutsos, Kara K Wools-Kaloustian, Beverly S Musick, Ann W Mwangi, Lameck O Diero, Sylvester N Kimaiyo, William M Tierney, Jane E Carter (2013) Active tuberculosis is associated with worse clinical outcomes in HIV-infected African patients on antiretroviral therapy., PloS one 8(1), Yolande Richard (ed.), p. e53022, url, doi:10.1371/journal.pone.0053022

Marita Mann, Lameck Diero, Emmanuel Kemboi, Fidelis Mambo, Mary Rono, Wilfred Injera, Allison Delong, Leeann Schreier, Kara Wools-Kaloustian, Kara W Kaloustian, John Sidle, Nathan Buziba, Rami Kantor (2013) Antiretroviral treatment interruptions induced by the Kenyan postelection crisis are associated with virological failure., Journal of acquired immune deficiency syndromes (1999) 64(2), p. 220-4, url, doi:10.1097/QAI.0b013e31829ec485

Elvin H Geng, Mwebesa B Bwana, Winnie Muyindike, David V Glidden, David R Bangsberg, Torsten B Neilands, Ingrid Bernheimer, Nicolas Musinguzi, Constantin T Yiannoutsos, Jeffrey N Martin (2013) Failure to initiate antiretroviral therapy, loss to follow-up and mortality among HIV-infected patients during the pre-ART period in Uganda., Journal of acquired immune deficiency syndromes (1999) 63(2), p. e64-71, url, doi:10.1097/QAI.0b013e31828af5a6

Andrea L Ciaranello, Bethany L Morris, Rochelle P Walensky, Milton C Weinstein, Samuel Ayaya, Kathleen Doherty, Valeriane Leroy, Taige Hou, Sophie Desmonde, Zhigang Lu, Farzad Noubary, Kunjal Patel, Lynn Ramirez-Avila, Elena Losina, George R Seage, Kenneth A Freedberg (2013) Validation and calibration of a computer simulation model of pediatric HIV infection., PloS one 8(12), Ravi Jhaveri (ed.), p. e83389, url, doi:10.1371/journal.pone.0083389

2012

Constantin Theodore Yiannoutsos, Leigh Francis Johnson, Andrew Boulle, Beverly Sue Musick, Thomas Gsponer, Eric Balestre, Matthew Law, Bryan E Shepherd, Matthias Egger, International Epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration (2012) Estimated mortality of adult HIV-infected patients starting treatment with combination antiretroviral therapy., Sexually transmitted infections 88 Suppl 2(Suppl 2), p. i33-43, url, doi:10.1136/sextrans-2012-050658

Elvin H Geng, David V Glidden, David R Bangsberg, Mwebesa Bosco Bwana, Nicholas Musinguzi, Denis Nash, John Z Metcalfe, Constantin T Yiannoutsos, Jeffrey N Martin, Maya L Petersen (2012) A causal framework for understanding the effect of losses to follow-up on epidemiologic analyses in clinic-based cohorts: the case of HIV-infected patients on antiretroviral therapy in Africa., American journal of epidemiology 175(10), p. 1080-7, url, doi:10.1093/aje/kwr444

Aggrey S Semeere, Naftali Busakhala, Jeffrey N Martin (2012) Impact of antiretroviral therapy on the incidence of Kaposi's sarcoma in resource-rich and resource-limited settings., Current opinion in oncology 24(5), p. 522-30, url, doi:10.1097/CCO.0b013e328355e14b

2011

Matthias Egger, Ben D Spycher, John Sidle, Ralf Weigel, Elvin H Geng, Matthew P Fox, Patrick MacPhail, Gilles van Cutsem, Eugène Messou, Robin Wood, Denis Nash, Margaret Pascoe, Diana Dickinson, Jean-François Etard, James A McIntyre, Martin W G Brinkhof, IeDEA East Africa, West Africa and Southern Africa (2011) Correcting mortality for loss to follow-up: a nomogram applied to antiretroviral treatment programmes in sub-Saharan Africa., PLoS medicine 8(1), Gregory P. Bisson (ed.), p. e1000390, url, doi:10.1371/journal.pmed.1000390

Paula Braitstein, Julia Songok, Rachel C Vreeman, Kara K Wools-Kaloustian, Pamela Koskei, Leahbell Walusuna, Samwel Ayaya, Winstone Nyandiko, Constantin Yiannoutsos (2011) "Wamepotea" (they have become lost): outcomes of HIV-positive and HIV-exposed children lost to follow-up from a large HIV treatment program in western Kenya., Journal of acquired immune deficiency syndromes (1999) 57(3), p. e40-6, url, doi:10.1097/QAI.0b013e3182167f0d

R Scott Braithwaite, Kimberly A Nucifora, Constantin T Yiannoutsos, Beverly Musick, Sylvester Kimaiyo, Lameck Diero, Melanie C Bacon, Kara Wools-Kaloustian (2011) Alternative antiretroviral monitoring strategies for HIV-infected patients in east Africa: opportunities to save more lives?, Journal of the International AIDS Society 14(1), p. 38, url, doi:10.1186/1758-2652-14-38

Elvin H Geng, David V Glidden, Mwebesa Bosco Bwana, Nicolas Musinguzi, Nneka Emenyonu, Winnie Muyindike, Katerina A Christopoulos, Torsten B Neilands, Constantin T Yiannoutsos, Steven G Deeks, David R Bangsberg, Jeffrey N Martin (2011) Retention in care and connection to care among HIV-infected patients on antiretroviral therapy in Africa: estimation via a sampling-based approach., PloS one 6(7), Landon Myer (ed.), p. e21797, url, doi:10.1371/journal.pone.0021797

Elvin H Geng, Peter W Hunt, Lameck O Diero, Sylvester Kimaiyo, Geofrey R Somi, Pius Okong, David R Bangsberg, Mwebesa B Bwana, Craig R Cohen, Juliana A Otieno, Deo Wabwire, Batya Elul, Denis Nash, Philippa J Easterbrook, Paula Braitstein, Beverly S Musick, Jeffrey N Martin, Constantin T Yiannoutsos, Kara Wools-Kaloustian (2011) Trends in the clinical characteristics of HIV-infected patients initiating antiretroviral therapy in Kenya, Uganda and Tanzania between 2002 and 2009., Journal of the International AIDS Society 14(1), p. 46, url, doi:10.1186/1758-2652-14-46

David M Moore, Constantin T Yiannoutsos, Beverly S Musick, Jordan Tappero, Richard Degerman, James Campbell, Willy Were, Frank Kaharuza, Lorraine N Alexander, Robert Downing, Jonathan Mermin (2011) Determinants of early and late mortality among HIV-infected individuals receiving home-based antiretroviral therapy in rural Uganda., Journal of acquired immune deficiency syndromes (1999) 58(3), p. 289-96, url, doi:10.1097/QAI.0b013e3182303716

2010

Martin W G Brinkhof, Ben D Spycher, Constantin Yiannoutsos, Ralf Weigel, Robin Wood, Eugène Messou, Andrew Boulle, Matthias Egger, Jonathan A C Sterne, International epidemiological Database to Evaluate AIDS (IeDEA) (2010) Adjusting mortality for loss to follow-up: analysis of five ART programmes in sub-Saharan Africa., PloS one 5(11), Geneviève Chêne (ed.), p. e14149, url, doi:10.1371/journal.pone.0014149

Elvin H Geng, David R Bangsberg, Nicolas Musinguzi, Nneka Emenyonu, Mwebesa Bosco Bwana, Constantin T Yiannoutsos, David V Glidden, Steven G Deeks, Jeffrey N Martin (2010) Understanding reasons for and outcomes of patients lost to follow-up in antiretroviral therapy programs in Africa through a sampling-based approach., Journal of acquired immune deficiency syndromes (1999) 53(3), p. 405-11, url, doi:10.1097/QAI.0b013e3181b843f0

Winstone M Nyandiko, Boaz Otieno-Nyunya, Beverly Musick, Sherri Bucher-Yiannoutsos, Pamela Akhaabi, Karin Lane, Constantin T Yiannoutsos, Kara Wools-Kaloustian (2010) Outcomes of HIV-exposed children in western Kenya: efficacy of prevention of mother to child transmission in a resource-constrained setting., Journal of acquired immune deficiency syndromes (1999) 54(1), p. 42-50, url, doi:10.1097/QAI.0b013e3181d8ad51

Paula Braitstein, Adrian Katshcke, Changyu Shen, Edwin Sang, Winstone Nyandiko, Vincent Ooko Ochieng, Rachel Vreeman, Constantin T Yiannoutsos, Kara Wools-Kaloustian, Samwel Ayaya (2010) Retention of HIV-infected and HIV-exposed children in a comprehensive HIV clinical care programme in Western Kenya., Tropical medicine & international health : TM & IH 15(7), p. 833-41, url, doi:10.1111/j.1365-3156.2010.02539.x

Elvin H Geng, Mwebesa B Bwana, Jerome Kabakyenga, Winnie Muyindike, Nneka I Emenyonu, Nicholas Musinguzi, Peter Mugyenyi, Jeffrey N Martin, David R Bangsberg (2010) Diminishing availability of publicly funded slots for antiretroviral initiation among HIV-infected ART-eligible patients in Uganda., PloS one 5(11), Landon Myer (ed.), p. e14098, url, doi:10.1371/journal.pone.0014098

Elvin H Geng, David V Glidden, Nneka Emenyonu, Nicolas Musinguzi, Mwebwesa Bosco Bwana, Torsten B Neilands, Winnie Muyindike, Constantin T Yiannoutsos, Steven G Deeks, David R Bangsberg, Jeffrey N Martin (2010) Tracking a sample of patients lost to follow-up has a major impact on understanding determinants of survival in HIV-infected patients on antiretroviral therapy in Africa., Tropical medicine & international health : TM & IH 15 Suppl 1, p. 63-9, url, doi:10.1111/j.1365-3156.2010.02507.x

2009

Isaac M Kigozi, Loren M Dobkin, Jeffrey N Martin, Elvin H Geng, Winnie Muyindike, Nneka I Emenyonu, David R Bangsberg, Judith A Hahn (2009) Late-disease stage at presentation to an HIV clinic in the era of free antiretroviral therapy in Sub-Saharan Africa., Journal of acquired immune deficiency syndromes (1999) 52(2), p. 280-9, url, doi:10.1097/QAI.0b013e3181ab6eab

2008

Elvin H Geng, Nneka Emenyonu, Mwebesa Bosco Bwana, David V Glidden, Jeffrey N Martin (2008) Sampling-based approach to determining outcomes of patients lost to follow-up in antiretroviral therapy scale-up programs in Africa., JAMA 300(5), p. 506-7, url, doi:10.1001/jama.300.5.506