Southern Africa regional publications

2017

Mary-Ann Davies, Priscilla Tsondai, Nicki Tiffin, Brian Eley, Helena Rabie, Jonathan Euvrard, Catherine Orrell, Hans Prozesky, Robin Wood, Dolphina Cogill, Andreas D Haas, Annette H Sohn, Andrew Boulle (2017) Where do HIV-infected adolescents go after transfer? - Tracking transition/transfer of HIV-infected adolescents using linkage of cohort data to a health information system platform., Journal of the International AIDS Society 20(Suppl 3), p. 16-24, url, doi:10.7448/IAS.20.4.21668

Steven A Brown, Salma Abbas, Mary-Ann Davies, Torsak Bunupuradah, Annette H Sohn, Karl-Günter Technau, Lorna Renner, Valériane Leroy, Andrew Edmonds, Marcel Yotebieng, Catherine C McGowan, Stephany N Duda, Lynne Mofenson, Beverly Musick, Kara Wools-Kaloustian (2017) Pediatric Cancer Burden and Treatment Resources within the Pediatric IeDEA Consortium., Journal of acquired immune deficiency syndromes (1999), p. 1, url, doi:10.1097/QAI.0000000000001453

James G Carlucci, Meridith Blevins Peratikos, Aaron M Kipp, Mary L Lindegren, Quy T Du, Lorna Renner, Gary Reubenson, John Ssali, Marcel Yotebieng, Anna M Mandalakas, Mary-Ann Davies, Marie Ballif, Lukas Fenner, April C Pettit, International Epidemiology Databases to Evaluate AIDS (IeDEA) Network (2017) Tuberculosis Treatment Outcomes Among HIV/TB-Coinfected Children in the International Epidemiology Databases to Evaluate AIDS (IeDEA) Network., Journal of acquired immune deficiency syndromes (1999) 75(2), p. 156-163, url, doi:10.1097/QAI.0000000000001335

Melony Fortuin-de Smidt, Reneé de Waal, Karen Cohen, Karl-Günter Technau, Kathryn Stinson, Gary Maartens, Andrew Boulle, Ehimario U Igumbor, Mary-Ann Davies (2017) First-line antiretroviral drug discontinuations in children., PloS one 12(2), Abdelwahab Omri (ed.), p. e0169762, url, doi:10.1371/journal.pone.0169762

Kathrin Zürcher, Anne Mooser, Nanina Anderegg, Olga Tymejczyk, Margaret J Couvillon, Denis Nash, Matthias Egger, IeDEA and MESH consortia (2017) Outcomes of HIV-positive patients lost to follow-up in African treatment programmes., Tropical medicine & international health : TM & IH 22(4), p. 375-387, url, doi:10.1111/tmi.12843

Abigail L Manson, Keira A Cohen, Thomas Abeel, Christopher A Desjardins, Derek T Armstrong, Clifton E Barry, Jeannette Brand, Jeannette TBResist Global Genome Consortium, Sinéad B Chapman, Sang-Nae Cho, Andrei Gabrielian, James Gomez, Andreea M Jodals, Moses Joloba, Pontus Jureen, Jong Seok Lee, Lesibana Malinga, Mamoudou Maiga, Dale Nordenberg, Ecaterina Noroc, Elena Romancenco, Alex Salazar, Willy Ssengooba, A A Velayati, Kathryn Winglee, Aksana Zalutskaya, Laura E Via, Gail H Cassell, Susan E Dorman, Jerrold Ellner, Parissa Farnia, James E Galagan, Alex Rosenthal, Valeriu Crudu, Daniela Homorodean, Po-Ren Hsueh, Sujatha Narayanan, Alexander S Pym, Alena Skrahina, Soumya Swaminathan, Martie Van der Walt, David Alland, William R Bishai, Ted Cohen, Sven Hoffner, Bruce W Birren, Ashlee M Earl, Alena Skrahina, Soumya Swaminathan, Martie Van der Walt, David Alland, William R Bishai, Ted Cohen, Sven Hoffner, Bruce W Birren, Ashlee M Earl (2017) Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into the emergence and spread of multidrug resistance., Nature genetics 49(3), p. 395-402, url, doi:10.1038/ng.3767

Anastasia S Koch, Daniela Brites, David Stucki, Joanna C Evans, Ronnett Seldon, Alexa Heekes, Nicola Mulder, Mark Nicol, Tolu Oni, Valerie Mizrahi, Digby F Warner, Julian Parkhill, Sebastien Gagneux, Darren P Martin, Robert J Wilkinson (2017) The Influence of HIV on the Evolution of Mycobacterium tuberculosis., Molecular biology and evolution 34(7), p. 1654-1668, url, doi:10.1093/molbev/msx107

Y F van der Heijden, F Karim, G Mufamadi, L Zako, T Chinappa, B E Shepherd, F Maruri, M-Y S Moosa, T R Sterling, A S Pym (2017) Isoniazid-monoresistant tuberculosis is associated with poor treatment outcomes in Durban, South Africa., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 21(6), p. 670-676, pubmed, doi:10.5588/ijtld.16.0843

Alana T Brennan, Mary-Ann Davies, Jacob Bor, Gilles Wandeler, Kathryn Stinson, Robin Wood, Hans Prozesky, Frank Tanser, Geoffrey Fatti, Andrew Boulle, Izukanji Sikazwe, Kara Wool-Kaloustian, Constantin Yuannoutsos, Valériane Leroy, Nathalie de Rekeneire, Matthew P Fox (2017) Has the phasing out of stavudine in accordance with changes in WHO guidelines led to a decrease in single-drug substitutions in first-line antiretroviral therapy for HIV in sub-Saharan Africa?, AIDS (London, England) 31(1), p. 147-157, pubmed, doi:10.1097/QAD.0000000000001307

Elvira Singh, Gita Naidu, Mary-Ann Davies, Julia Bohlius (2017) HIV-associated malignancies in children., Current opinion in HIV and AIDS 12(1), p. 77-83, pubmed, doi:10.1097/COH.0000000000000331

2016

Mazvita Sengayi, Adrian Spoerri, Matthias Egger, Danuta Kielkowski, Tamaryn Crankshaw, Christie Cloete, Janet Giddy, Julia Bohlius (2016) Record linkage to correct under-ascertainment of cancers in HIV cohorts: The Sinikithemba HIV clinic linkage project, International Journal of Cancer 139(6), p. 1209-1216, url, doi:10.1002/ijc.30154

Michael J Vinikoor, Lloyd Mulenga, Alice Siyunda, Kalo Musukuma, Roma Chilengi, Carolyn Bolton Moore, Benjamin H Chi, Mary-Ann Davies, Matthias Egger, Gilles Wandeler, International Epidemiologic Databases to Evaluate AIDS in Southern Africa (IeDEA-SA) (2016) Association between hepatitis B co-infection and elevated liver stiffness among HIV-infected adults in Lusaka, Zambia., Tropical medicine & international health : TM & IH 21(11), p. 1435-1441, url, doi:10.1111/tmi.12764

Gilles Wandeler, Lloyd Mulenga, Michael J Vinikoor, Helen Kovari, Manuel Battegay, Alexandra Calmy, Matthias Cavassini, Enos Bernasconi, Patrick Schmid, Carolyn Bolton-Moore, Edford Sinkala, Benjamin H Chi, Matthias Egger, Andri Rauch, for IeDEA-Southern Africa and the Swiss HIV Cohort Study (2016) Liver fibrosis in treatment-naïve HIV-infected and HIV/HBV co-infected patients: Zambia and Switzerland compared., International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 51, p. 97-102, url, doi:10.1016/j.ijid.2016.08.028

Tiago Castro Lopes Azevedo, Marcel Zwahlen, Andri Rauch, Matthias Egger, Gilles Wandeler (2016) Hepatitis C in HIV-infected individuals: a systematic review and meta-analysis of estimated prevalence in Africa, Journal of the International AIDS Society 19(1), url, doi:10.7448/IAS.19.1.20711

Beth Rachlis, Rakhi Karwa, Celia Chema, Sonak Pastakia, Sten Olsson, Kara Wools-Kaloustian, Beatrice Jakait, Mercy Maina, Marcel Yotebieng, Nagalingeswaran Kumarasamy, Aimee Freeman, Nathalie de Rekeneire, Stephany N Duda, Mary-Ann Davies, Paula Braitstein (2016) Targeted Spontaneous Reporting: Assessing Opportunities to Conduct Routine Pharmacovigilance for Antiretroviral Treatment on an International Scale., Drug safety 39(10), p. 959-76, url, doi:10.1007/s40264-016-0434-9

M Katherine Charles, Mary Lou Lindegren, C William Wester, Meridith Blevins, Timothy R Sterling, Nguyen Thi Dung, Jean Claude Dusingize, Divine Avit-Edi, Nicolas Durier, Barbara Castelnuovo, Gertrude Nakigozi, Claudia P Cortes, Marie Ballif, Lukas Fenner, International epidemiology Databases to Evaluate AIDS (IeDEA) Collaboration (2016) Implementation of Tuberculosis Intensive Case Finding, Isoniazid Preventive Therapy, and Infection Control ("Three I's") and HIV-Tuberculosis Service Integration in Lower Income Countries., PloS one 11(4), Juraj Ivanyi (ed.), p. e0153243, url, doi:10.1371/journal.pone.0153243

Lorin Begré, Eliane Rohner, Sam M Mbulaiteye, Matthias Egger, Julia Bohlius (2016) Is human herpesvirus 8 infection more common in men than in women? Systematic review and meta-analysis., International journal of cancer 139(4), p. 776-83, url, doi:10.1002/ijc.30129

Christopher A Desjardins, Keira A Cohen, Vanisha Munsamy, Thomas Abeel, Kashmeel Maharaj, Bruce J Walker, Terrance P Shea, Deepak V Almeida, Abigail L Manson, Alex Salazar, Nesri Padayatchi, Max R O'Donnell, Koleka P Mlisana, Jennifer Wortman, Bruce W Birren, Jacques Grosset, Ashlee M Earl, Alexander S Pym (2016) Genomic and functional analyses of Mycobacterium tuberculosis strains implicate ald in D-cycloserine resistance., Nature genetics 48(5), p. 544-51, url, doi:10.1038/ng.3548

Erna Morden, Karl-Günter Technau, Janet Giddy, Nicola Maxwell, Olivia Keiser, Mary-Ann Davies (2016) Growth of HIV-Exposed Uninfected Infants in the First 6 Months of Life in South Africa: The IeDEA-SA Collaboration., PloS one 11(4), Douglas F. Nixon (ed.), p. e0151762, url, doi:10.1371/journal.pone.0151762

Andreas D Haas, Lyson Tenthani, Malango T Msukwa, Kali Tal, Andreas Jahn, Oliver J Gadabu, Adrian Spoerri, Frank Chimbwandira, Joep J van Oosterhout, Olivia Keiser (2016) Retention in care during the first 3 years of antiretroviral therapy for women in Malawi's option B+ programme: an observational cohort study., The lancet. HIV 3(4), p. e175-82, url, doi:10.1016/S2352-3018(16)00008-4

Nello Blaser, Cindy Zahnd, Sabine Hermans, Luisa Salazar-Vizcaya, Janne Estill, Carl Morrow, Matthias Egger, Olivia Keiser, Robin Wood (2016) Tuberculosis in Cape Town: An age-structured transmission model., Epidemics 14, p. 54-61, url, doi:10.1016/j.epidem.2015.10.001

Gilles Wandeler, Kalo Musukuma, Samuel Zürcher, Michael J Vinikoor, Jara Llenas-García, Mussa M Aly, Lloyd Mulenga, Benjamin H Chi, Jochen Ehmer, Michael A Hobbins, Carolyn Bolton-Moore, Christopher J Hoffmann, Matthias Egger, IeDEA-Southern Africa (2016) Hepatitis B Infection, Viral Load and Resistance in HIV-Infected Patients in Mozambique and Zambia., PloS one 11(3), Isabelle A Chemin (ed.), p. e0152043, url, doi:10.1371/journal.pone.0152043

Janne Estill, Nathan Ford, Luisa Salazar-Vizcaya, Andreas D Haas, Nello Blaser, Vincent Habiyambere, Olivia Keiser (2016) The need for second-line antiretroviral therapy in adults in sub-Saharan Africa up to 2030: a mathematical modelling study., The lancet. HIV 3(3), p. e132-9, url, doi:10.1016/S2352-3018(16)00016-3

Hannock Tweya, Caryl Feldacker, Oliver Jintha Gadabu, Wingston Ng'ambi, Soyapi L Mumba, Dave Phiri, Luke Kamvazina, Shawo Mwakilama, Henry Kanyerere, Olivia Keiser, Johnbosco Mwafilaso, Chancy Kamba, Matthias Egger, Andreas Jahn, Bertha Simwaka, Sam Phiri (2016) Developing a point-of-care electronic medical record system for TB/HIV co-infected patients: experiences from Lighthouse Trust, Lilongwe, Malawi., BMC research notes 9(1), p. 146, url, doi:10.1186/s13104-016-1943-4

Julia Bohlius, Nicola Maxwell, Adrian Spoerri, Rosalind Wainwright, Shobna Sawry, Janet Poole, Brian Eley, Hans Prozesky, Helena Rabie, Daniela Garone, Karl-Günter Technau, Mhairi Maskew, Mary-Ann Davies, Alan Davidson, D Cristina Stefan, Matthias Egger, for IeDEA-Southern Africa (2016) Incidence of AIDS-defining and Other Cancers in HIV-positive Children in South Africa: Record Linkage Study., The Pediatric infectious disease journal 35(6), p. e164-70, url, doi:10.1097/INF.0000000000001117

Cristina Barroso Hofer, Olivia Keiser, Marcel Zwahlen, Carla Sepulveda Lustosa, Ana Cristina Cisne Frota, Ricardo Hugo de Oliveira, Thalita F Abreu, Alice Weber Carvalho, Lucia Evangelista Araujo, Matthias Egger (2016) In Utero Exposure to Antiretroviral Drugs: Effect on Birth Weight and Growth Among HIV-exposed Uninfected Children in Brazil., The Pediatric infectious disease journal 35(1), p. 71-7, url, doi:10.1097/INF.0000000000000926

Esther Freeman, Aggrey Semeere, Megan Wenger, Mwebesa Bwana, F Chite Asirwa, Naftali Busakhala, Emmanuel Oga, Elima Jedy-Agba, Vivian Kwaghe, Kenneth Iregbu, Antoine Jaquet, Francois Dabis, Habakkuk Azinyui Yumo, Jean Claude Dusingize, David Bangsberg, Kathryn Anastos, Sam Phiri, Julia Bohlius, Matthias Egger, Constantin Yiannoutsos, Kara Wools-Kaloustian, Jeffrey Martin (2016) Pitfalls of practicing cancer epidemiology in resource-limited settings: the case of survival and loss to follow-up after a diagnosis of Kaposi's sarcoma in five countries across sub-Saharan Africa., BMC cancer 16(1), p. 65, url, doi:10.1186/s12885-016-2080-0

Anna Grimsrud, Morna Cornell, Michael Schomaker, Matthew P Fox, Catherine Orrell, Hans Prozesky, Kathryn Stinson, Frank Tanser, Matthias Egger, Landon Myer, International Epidemiologic Databases to Evaluate AIDS Southern Africa Collaboration (IeDEA-SA) (2016) CD4 count at antiretroviral therapy initiation and the risk of loss to follow-up: results from a multicentre cohort study., Journal of epidemiology and community health 70(6), p. 549-55, url, doi:10.1136/jech-2015-206629

Hannock Tweya, Olivia Keiser, Andreas D Haas, Lyson Tenthani, Sam Phiri, Matthias Egger, Janne Estill (2016) Comparative cost-effectiveness of Option B+ for prevention of mother-to-child transmission of HIV in Malawi., AIDS (London, England) 30(6), p. 953-62, url, doi:10.1097/QAD.0000000000001009

Michael Schomaker, Mary-Ann Davies, Karen Malateste, Lorna Renner, Shobna Sawry, Sylvie N'Gbeche, Karl-Günter Technau, François Eboua, Frank Tanser, Haby Sygnaté-Sy, Sam Phiri, Madeleine Amorissani-Folquet, Vivian Cox, Fla Koueta, Cleophas Chimbete, Annette Lawson-Evi, Janet Giddy, Clarisse Amani-Bosse, Robin Wood, Matthias Egger, Valeriane Leroy, IeDEA West Africa and IeDEA Southern Africa collaboration (2016) Growth and Mortality Outcomes for Different Antiretroviral Therapy Initiation Criteria in Children Ages 1-5 Years: A Causal Modeling Analysis., Epidemiology (Cambridge, Mass.) 27(2), p. 237-46, url, doi:10.1097/EDE.0000000000000412

Eliane Rohner, Natascha Wyss, Zina Heg, Zully Faralli, Sam M Mbulaiteye, Urban Novak, Marcel Zwahlen, Matthias Egger, Julia Bohlius (2016) HIV and human herpesvirus 8 co-infection across the globe: Systematic review and meta-analysis., International journal of cancer 138(1), p. 45-54, url, doi:10.1002/ijc.29687

Gilles Wandeler, Lloyd Mulenga, Michael Hobbins, Candido Joao, Edford Sinkala, Jonas Hector, Musa Aly, Benjamin H Chi, Matthias Egger, Michael J Vinikoor (2016) Absence of Active Hepatitis C Virus Infection in Human Immunodeficiency Virus Clinics in Zambia and Mozambique., Open forum infectious diseases 3(2), p. ofw049, url, doi:10.1093/ofid/ofw049

Leigh F Johnson, Olivia Keiser, Matthew P Fox, Frank Tanser, Morna Cornell, Chris J Hoffmann, Hans Prozesky, Andrew Boulle, Mary-Ann Davies, International Epidemiologic Databases to Evaluate AIDS Southern Africa (IeDEA-SA) Collaboration (2016) Life expectancy trends in adults on antiretroviral treatment in South Africa., AIDS (London, England) 30(16), p. 2545-2550, pubmed, doi:10.1097/QAD.0000000000001197

Mary-Ann Davies, Diana Gibb, Anna Turkova (2016) Survival of HIV-1 vertically infected children., Current opinion in HIV and AIDS 11(5), p. 455-464, pubmed, doi:10.1097/COH.0000000000000303

Pediatric AIDS-Defining Cancer Project Working Group for IeDEA Southern Africa, TApHOD, and COHERE in EuroCoord (2016) Kaposi Sarcoma Risk in HIV-Infected Children and Adolescents on Combination Antiretroviral Therapy From Sub-Saharan Africa, Europe, and Asia., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 63(9), p. 1245-1253, pubmed, doi:10.1093/cid/ciw519

Andreas D Haas, Malango T Msukwa, Matthias Egger, Lyson Tenthani, Hannock Tweya, Andreas Jahn, Oliver J Gadabu, Kali Tal, Luisa Salazar-Vizcaya, Janne Estill, Adrian Spoerri, Nozgechi Phiri, Frank Chimbwandira, Joep J van Oosterhout, Olivia Keiser (2016) Adherence to Antiretroviral Therapy During and After Pregnancy: Cohort Study on Women Receiving Care in Malawi's Option B+ Program., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 63(9), p. 1227-1235, pubmed, doi:10.1093/cid/ciw500

Tiago Castro Lopes Azevedo, Marcel Zwahlen, Andri Rauch, Matthias Egger, Gilles Wandeler (2016) Hepatitis C in HIV-infected individuals: a systematic review and meta-analysis of estimated prevalence in Africa., Journal of the International AIDS Society 19(1), p. 20711, pubmed

Gilles Wandeler, Leigh F Johnson, Matthias Egger (2016) Trends in life expectancy of HIV-positive adults on antiretroviral therapy across the globe: comparisons with general population., Current opinion in HIV and AIDS 11(5), p. 492-500, pubmed, doi:10.1097/COH.0000000000000298

Mazvita Sengayi, Adrian Spoerri, Matthias Egger, Danuta Kielkowski, Tamaryn Crankshaw, Christie Cloete, Janet Giddy, Julia Bohlius (2016) Record linkage to correct under-ascertainment of cancers in HIV cohorts: The Sinikithemba HIV clinic linkage project., International journal of cancer 139(6), p. 1209-16, pubmed

2015

Leigh F Johnson, Rob E Dorrington, Ria Laubscher, Christopher J Hoffmann, Robin Wood, Matthew P Fox, Morna Cornell, Michael Schomaker, Hans Prozesky, Frank Tanser, Mary-Ann Davies, Andrew Boulle (2015) A comparison of death recording by health centres and civil registration in South Africans receiving antiretroviral treatment, Journal of the International AIDS Society 18(1), url, doi:10.7448/IAS.18.1.20628

Manuel Koller, Geoffrey Fatti, Benjamin H Chi, Olivia Keiser, Christopher J Hoffmann, Robin Wood, Hans Prozesky, Kathryn Stinson, Janet Giddy, Portia Mutevedzi, Matthew P Fox, Matthew Law, Andrew Boulle, Matthias Egger (2015) Implementation and Operational Research: Risk Charts to Guide Targeted HIV-1 Viral Load Monitoring of ART: Development and Validation in Patients From Resource-Limited Settings., Journal of acquired immune deficiency syndromes (1999) 70(3), p. e110-9, url, doi:10.1097/QAI.0000000000000748

Morna Cornell, Leigh F Johnson, Michael Schomaker, Frank Tanser, Mhairi Maskew, Robin Wood, Hans Prozesky, Janet Giddy, Kathryn Stinson, Matthias Egger, Andrew Boulle, Landon Myer, International Epidemiologic Databases to Evaluate AIDS-Southern Africa Collaboration (2015) Age in antiretroviral therapy programmes in South Africa: a retrospective, multicentre, observational cohort study., The lancet. HIV 2(9), p. e368-75, url, doi:10.1016/S2352-3018(15)00113-7

Andreas D Haas, Olivia Keiser, Eric Balestre, Steve Brown, Emmanuel Bissagnene, Cleophas Chimbetete, François Dabis, Mary-Ann Davies, Christopher J Hoffmann, Patrick Oyaro, Rosalind Parkes-Ratanshi, Steven J Reynolds, Izukanji Sikazwe, Kara Wools-Kaloustian, D Marcel Zannou, Gilles Wandeler, Matthias Egger, IeDEA southern Africa, east Africa, and west Africa (2015) Monitoring and switching of first-line antiretroviral therapy in adult treatment cohorts in sub-Saharan Africa: collaborative analysis., The lancet. HIV 2(7), p. e271-8, url, doi:10.1016/S2352-3018(15)00087-9

Sabine Hermans, Andrew Boulle, Judy Caldwell, David Pienaar, Robin Wood (2015) Temporal trends in TB notification rates during ART scale-up in Cape Town: an ecological analysis, Journal of the International AIDS Society 18(1), url, doi:10.7448/IAS.18.1.20240

Mary-Ann Davies, Nathan Ford, Helena Rabie, Geoffrey Fatti, Kathryn Stinson, Janet Giddy, Frank Tanser, Karl-Günter Technau, Shobna Sawry, Brian Eley, Robin Wood, Lynne M Mofenson, Olivia Keiser, Andrew Boulle (2015) Reducing CD4 Monitoring in Children on Antiretroviral Therapy With Virologic Suppression., The Pediatric infectious disease journal 34(12), p. 1361-4, url, doi:10.1097/INF.0000000000000912

Diana Huisin ʼt Veld, Eric Balestre, Jozefien Buyze, Joris Menten, Antoine Jaquet, David A Cooper, Francois Dabis, Constantin T Yiannoutsos, Lameck Diero, Portia Mutevedzi, Matthew P Fox, Eugene Messou, Christopher J Hoffmann, Hans W Prozesky, Matthias Egger, Jennifer J Hemingway-Foday, Robert Colebunders, International Epidemiologic Databases to Evaluate AIDS (IeDEA) (2015) Determinants of Weight Evolution Among HIV-Positive Patients Initiating Antiretroviral Treatment in Low-Resource Settings., Journal of acquired immune deficiency syndromes (1999) 70(2), p. 146-54, url, doi:10.1097/QAI.0000000000000691

Michael J Vinikoor, Samuel Zürcher, Kalo Musukuma, Obert Kachuwaire, Andri Rauch, Benjamin H Chi, Meri Gorgievski, Marcel Zwahlen, Gilles Wandeler (2015) Hepatitis B viral load in dried blood spots: A validation study in Zambia., Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 72, p. 20-4, url, doi:10.1016/j.jcv.2015.08.019

Sabine Hermans, C Robert Horsburgh, Robin Wood (2015) A Century of Tuberculosis Epidemiology in the Northern and Southern Hemisphere: The Differential Impact of Control Interventions., PloS one 10(8), Keertan Dheda (ed.), p. e0135179, url, doi:10.1371/journal.pone.0135179

Manuel Koller, Kunjal Patel, Benjamin H Chi, Kara Wools-Kaloustian, Fatoumata Dicko, Kulkanya Chokephaibulkit, Cleophas Chimbetete, Rohan Hazra, Samual Ayaya, Valeriane Leroy, Huu Khanh Trong, Matthias Egger, Mary-Ann Davies, IeDEA, NISDI, PHACS and IMPAACT 219C Studies (2015) Authors' Reply: Early Initiation of Antiretroviral Therapy Among Young Children: A Long Way to Go., Journal of acquired immune deficiency syndromes (1999) 70(2), p. e71-2, url, doi:10.1097/QAI.0000000000000773

Michael Schomaker, Sara Hogger, Leigh F Johnson, Christopher J Hoffmann, Till Bärnighausen, Christian Heumann (2015) Simultaneous Treatment of Missing Data and Measurement Error in HIV Research Using Multiple Overimputation., Epidemiology (Cambridge, Mass.) 26(5), p. 628-36, url, doi:10.1097/EDE.0000000000000334

Olivia Keiser, Nello Blaser, Mary-Ann Davies, Patrick Wessa, Brian Eley, Harry Moultrie, Helena Rabie, Karl-Günther Technau, James Ndirangu, Daniela Garone, Janet Giddy, Ashraf Grimwood, Thomas Gsponer, Matthias Egger, for IeDEA Southern Africa (2015) Growth in Virologically Suppressed HIV-Positive Children on Antiretroviral Therapy: Individual and Population-level References., The Pediatric infectious disease journal 34(10), p. e254-9, url, doi:10.1097/INF.0000000000000801

Marie Ballif, Lorna Renner, Jean Claude Dusingize, Valeriane Leroy, Samuel Ayaya, Kara Wools-Kaloustian, Claudia P Cortes, Catherine C McGowan, Claire Graber, Anna M Mandalakas, Lynne M Mofenson, Matthias Egger, Ketut Dewi Kumara Wati, Revathy Nallusamy, Gary Reubenson, Mary-Ann Davies, Lukas Fenner, International Epidemiologic Databases to Evaluate AIDS (IeDEA), S. International Epidemiologic Databases to Evaluate AIDS IeDEA, K. Anastos, M. Ballif, J. Bashi, W. Bishai, A. Boulle, P. Braitstein, G. Carriquiry, J. E. Carter, P. Cegielski, C. Chimbetete, J. Conrad, C. Cortes, M.-A. Davies, L. Diero, S. Duda, N. Durier, J. C. Dusingize, M. Egger, T. F. Eboua, L. Fenner, A. Gasser, E. Geng, J. C. Gnokori, L. Hardwicke, C. Hoffmann, R. Huebner, N. Kancheya, S. Kiertiburanakul, P. Kim, D. Lameck, V. Leroy, C. Lewden, M. L. Lindegren, A. Mandalakas, M. Maskew, R. McKaig, L. Mofenson, M. Mpoudi-Etame, B. Okwara, S. Phiri, W. Prasitsuebsai, A. Petit, H. Prozesky, S. E. Reid, L. Renner, G. Reubenson, A. Sohn, T. Sterling, Q. Vo, D. Walker, F. Wehbe, C. Wejse, W. Wester, C. Williams, R. Wood, K. Wools-Kaloustian, Z. Yao, E. Yunihastuti, E. Abrams, J. Ananworanich, K. Anastos, A. Azondekon, M. B. Frieda Behets, A. Boulle, P. Braitstein, P. Cahn, C. Cesar, A. Ciaranello, J. Conrad, F. Dabis, M.-A. Davies, A. Edmonds, M. Egger, L. Feinstein, C. Graber, L. Hardwicke, R. Hazra, D. Hoover, R. Huebner, O. Keiser, V. Leroy, M. L. Lindegren, M. C. Magneres, C. McGowan, R. McKaig, L. Messerschmidt, L. Mofenson, M. Mpoudi-Etame, H. N. Biribonwoha, G. Sharp, A. Sohn, Q. Vo, R. Vreeman, D. Walker, F. Wehbe, W. Wester, C. Williams, K. Wools-Kaloustian, C. Worrell, C. Yiannoutsos, B. Zwickl (2015) Tuberculosis in Pediatric Antiretroviral Therapy Programs in Low- and Middle-Income Countries: Diagnosis and Screening Practices., Journal of the Pediatric Infectious Diseases Society 4(1), p. 30-8, url, doi:10.1093/jpids/piu020

Sabine Hermans, Andrew Boulle, Judy Caldwell, David Pienaar, Robin Wood (2015) Temporal trends in TB notification rates during ART scale-up in Cape Town: an ecological analysis., Journal of the International AIDS Society 18, p. 20240, pubmed

Leigh F Johnson, Rob E Dorrington, Ria Laubscher, Christopher J Hoffmann, Robin Wood, Matthew P Fox, Morna Cornell, Michael Schomaker, Hans Prozesky, Frank Tanser, Mary-Ann Davies, Andrew Boulle, International Epidemiologic Databases to Evaluate AIDS Southern Africa (IeDEA-SA) Collaboration (2015) A comparison of death recording by health centres and civil registration in South Africans receiving antiretroviral treatment., Journal of the International AIDS Society 18, p. 20628, pubmed

Daniel M Brown, Maya Petersen, Sadie Costello, Elizabeth M Noth, Katherine Hammond, Mark Cullen, Mark van der Laan, Ellen Eisen (2015) Occupational Exposure to PM2.5 and Incidence of Ischemic Heart Disease: Longitudinal Targeted Minimum Loss-based Estimation., Epidemiology (Cambridge, Mass.) 26(6), p. 806-14, url, doi:10.1097/EDE.0000000000000329

Mazvita Sengayi, Chantal Babb, Matthias Egger, Margaret I Urban (2015) HIV testing and burden of HIV infection in black cancer patients in Johannesburg, South Africa: a cross-sectional study., BMC cancer 15(1), p. 144, url, doi:10.1186/s12885-015-1171-7

Janne Estill, Luisa Salazar-Vizcaya, Nello Blaser, Matthias Egger, Olivia Keiser (2015) The cost-effectiveness of monitoring strategies for antiretroviral therapy of HIV infected patients in resource-limited settings: software tool., PloS one 10(3), Alash'le G. Abimiku (ed.), p. e0119299, url, doi:10.1371/journal.pone.0119299

Lyson Tenthani, Andreas D Haas, Matthias Egger, Joep J Van Oosterhout, Andreas Jahn, Frank Chimbwandira, Kali Tal, Landon Myer, Janne Estill, Olivia Keiser (2015) Brief Report: HIV Testing Among Pregnant Women Who Attend Antenatal Care in Malawi., Journal of acquired immune deficiency syndromes (1999) 69(5), p. 610-4, url, doi:10.1097/QAI.0000000000000669

Richard G White, Avi J Hakim, Matthew J Salganik, Michael W Spiller, Lisa G Johnston, Ligia Kerr, Carl Kendall, Amy Drake, David Wilson, Kate Orroth, Matthias Egger, Wolfgang Hladik (2015) Strengthening the Reporting of Observational Studies in Epidemiology for respondent-driven sampling studies: "STROBE-RDS" statement., Journal of clinical epidemiology 68(12), p. 1463-71, url, doi:10.1016/j.jclinepi.2015.04.002

Mireille Porter, Mary-Ann Davies, Muntanga K Mapani, Helena Rabie, Sam Phiri, James Nuttall, Lee Fairlie, Karl-Günter Technau, Kathryn Stinson, Robin Wood, Maureen Wellington, Andreas D Haas, Janet Giddy, Frank Tanser, Brian Eley (2015) Outcomes of Infants Starting Antiretroviral Therapy in Southern Africa, 2004-2012., Journal of acquired immune deficiency syndromes (1999) 69(5), p. 593-601, url, doi:10.1097/QAI.0000000000000683

Matthias Egger, Leigh F Johnson (2015) Estimating trends in life expectancy in HIV-positive individuals., The Lancet. Global health 3(3), p. e122-3, url, doi:10.1016/S2214-109X(14)70383-3

Manuel Koller, Keri N Althoff, Mary-Ann Davies, Matthias Egger (2015) Authors' reply: immunodeficiency at the start of combination antiretroviral therapy: steady improvement or step changes?, Journal of acquired immune deficiency syndromes (1999) 68(1), p. e16-7, url, doi:10.1097/QAI.0000000000000399

Marcel Yotebieng, Tammy Meyers, Frieda Behets, Mary-Ann Davies, Olivia Keiser, Kapella Zacharia Ngonyani, Rita E Lyamuya, Azar Kariminia, Rawiwan Hansudewechakul, Valeriane Leroy, Sikiratou Koumakpai, Jamie Newman, Annelies Van Rie (2015) Age-specific and sex-specific weight gain norms to monitor antiretroviral therapy in children in low-income and middle-income countries., AIDS (London, England) 29(1), p. 101-9, url, doi:10.1097/QAD.0000000000000506

Manuel Koller, Kunjal Patel, Benjamin H Chi, Kara Wools-Kaloustian, Fatoumata Dicko, Kulkanya Chokephaibulkit, Cleophas Chimbetete, Dorita Avila, Rohan Hazra, Samual Ayaya, Valeriane Leroy, Huu Khanh Truong, Matthias Egger, Mary-Ann Davies, IeDEA, NISDI, PHACS and IMPAACT 219C studies (2015) Immunodeficiency in children starting antiretroviral therapy in low-, middle-, and high-income countries., Journal of acquired immune deficiency syndromes (1999) 68(1), p. 62-72, url, doi:10.1097/QAI.0000000000000380

Julia Bohlius, Mhairi Maskew, Mary-Ann Davies, Matthias Egger (2015) HHV-8 seroprevalence in HIV-positive and HIV-negative populations., International journal of cancer 136(5), p. 1243, url, doi:10.1002/ijc.29183

David Stucki, Marie Ballif, Thomas Bodmer, Mireia Coscolla, Anne-Marie Maurer, Sara Droz, Christa Butz, Sonia Borrell, Christel Längle, Julia Feldmann, Hansjakob Furrer, Carlo Mordasini, Peter Helbling, Hans L Rieder, Matthias Egger, Sébastien Gagneux, Lukas Fenner (2015) Tracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing., The Journal of infectious diseases 211(8), p. 1306-16, url, doi:10.1093/infdis/jiu601

Nello Blaser, Luisa Salazar Vizcaya, Janne Estill, Cindy Zahnd, Bindu Kalesan, Matthias Egger, Thomas Gsponer, Olivia Keiser (2015) gems: An R Package for Simulating from Disease Progression Models., Journal of statistical software 64(10), p. 1-22, pubmed

Elvin H Geng, Torsten B Neilands, Rodolphe Thièbaut, Mwebesa Bosco Bwana, Denis Nash, Richard D Moore, Robin Wood, Djimon Marcel Zannou, Keri N Althoff, Poh Lian Lim, Jean B Nachega, Philippa J Easterbrook, Andrew Kambugu, Francesca Little, Gertrude Nakigozi, Damalie Nakanjako, Valerian Kiggundu, Patrick Chung Ki Li, David R Bangsberg, Matthew P Fox, HansW Prozesky, Peter W Hunt, Mary-Ann Davies, Steven J Reynolds, Matthias Egger, Constantin T Yiannoutsos, Eric V Vittinghoff, Steven G Deeks, Jeffrey N Martin (2015) CD41 T cell recovery during suppression of HIV replication: an international comparison of the immunological efficacy of antiretroviral therapy in North America, Asia and Africa., International journal of epidemiology 44(1), p. 251-63, pubmed

Mireille Porter, Mary-Ann Davies, Muntanga K. Mapani, Helena Rabie, Sam Phiri, James Nuttall, Lee Fairlie, Karl-Günter Technau, Kathryn Stinson, Robin Wood, Maureen Wellington, Andreas D. Haas, Janet Giddy, Frank Tanser, Brian Eley (2015) Outcomes of Infants Starting Antiretroviral Therapy in Southern Africa, 2004–2012, JAIDS Journal of Acquired Immune Deficiency Syndromes 69(5), p. 593-601, url, doi:10.1097/QAI.0000000000000683

Mireille Porter, Mary-Ann Davies, Muntanga K. Mapani, Helena Rabie, Sam Phiri, James Nuttall, Lee Fairlie, Karl-G?nter Technau, Kathryn Stinson, Robin Wood, Maureen Wellington, Andreas D. Haas, Janet Giddy, Frank Tanser, Brian Eley (2015) Outcomes of Infants Starting Antiretroviral Therapy in Southern Africa, 2004?2012, JAIDS Journal of Acquired Immune Deficiency Syndromes 69(5), p. 593-601, url, doi:10.1097/QAI.0000000000000683

Mireille Porter, Mary-Ann Davies, Muntanga K. Mapani, Helena Rabie, Sam Phiri, James Nuttall, Lee Fairlie, Karl-G?nter Technau, Kathryn Stinson, Robin Wood, Maureen Wellington, Andreas D. Haas, Janet Giddy, Frank Tanser, Brian Eley (2015) Outcomes of Infants Starting Antiretroviral Therapy in Southern Africa, 2004?2012, JAIDS Journal of Acquired Immune Deficiency Syndromes 69(5), p. 593-601, url, doi:10.1097/QAI.0000000000000683

2014

Stephany N Duda, Amanda M Farr, Mary Lou Lindegren, Meridith Blevins, C William Wester, Kara Wools-Kaloustian, Didier K Ekouevi, Matthias Egger, Jennifer Hemingway-Foday, David A Cooper, Richard D Moore, Catherine C McGowan, Denis Nash (2014) Characteristics and comprehensiveness of adult HIV care and treatment programmes in Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration, Journal of the International AIDS Society 17(1), url, doi:10.7448/IAS.17.1.19045

Eliane Rohner, Fabio Valeri, Mhairi Maskew, Hans Prozesky, Helena Rabie, Daniela Garone, Diana Dickinson, Cleophas Chimbetete, Priscilla Lumano-Mulenga, Izukanji Sikazwe, Natascha Wyss, Kerri M Clough-Gorr, Matthias Egger, Benjamin H Chi, Julia Bohlius (2014) Incidence rate of Kaposi sarcoma in HIV-infected patients on antiretroviral therapy in Southern Africa: a prospective multicohort study., Journal of acquired immune deficiency syndromes (1999) 67(5), p. 547-54, url, doi:10.1097/QAI.0000000000000360

Maya L Petersen (2014) Commentary: Applying a causal road map in settings with time-dependent confounding., Epidemiology (Cambridge, Mass.) 25(6), p. 898-901, url, doi:10.1097/EDE.0000000000000178

M Ballif, V Nhandu, R Wood, J C Dusingize, E J Carter, C P Cortes, C C McGowan, L Diero, C Graber, L Renner, D Hawerlander, S Kiertiburanakul, Q T Du, T R Sterling, M Egger, L Fenner, International epidemiological Databases to Evaluate AIDS (IeDEA) (2014) Detection and management of drug-resistant tuberculosis in HIV-infected patients in lower-income countries., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 18(11), p. 1327-36, url, doi:10.5588/ijtld.14.0106

Maya Petersen, Constantin T Yiannoutsos, Amy Justice, Matthias Egger (2014) Observational research on NCDs in HIV-positive populations: conceptual and methodological considerations., Journal of acquired immune deficiency syndromes (1999) 67 Suppl 1, p. S8-16, url, doi:10.1097/QAI.0000000000000253

Andrew Boulle, Michael Schomaker, Margaret T May, Robert S Hogg, Bryan E Shepherd, Susana Monge, Olivia Keiser, Fiona C Lampe, Janet Giddy, James Ndirangu, Daniela Garone, Matthew Fox, Suzanne M Ingle, Peter Reiss, Francois Dabis, Dominique Costagliola, Antonella Castagna, Kathrin Ehren, Colin Campbell, M John Gill, Michael Saag, Amy C Justice, Jodie Guest, Heidi M Crane, Matthias Egger, Jonathan A C Sterne (2014) Mortality in patients with HIV-1 infection starting antiretroviral therapy in South Africa, Europe, or North America: a collaborative analysis of prospective studies., PLoS medicine 11(9), Agnes Binagwaho (ed.), p. e1001718, url, doi:10.1371/journal.pmed.1001718

Nyanyiwe M Mbeye, Feiko O ter Kuile, Mary-Ann Davies, Kamija S Phiri, Matthias Egger, Gilles Wandeler, IeDEA-Southern Africa (2014) Cotrimoxazole prophylactic treatment prevents malaria in children in sub-Saharan Africa: systematic review and meta-analysis., Tropical medicine & international health : TM & IH 19(9), p. 1057-67, url, doi:10.1111/tmi.12352

Morna Cornell, Richard Lessells, Matthew P Fox, Daniela B Garone, Janet Giddy, Lukas Fenner, Landon Myer, Andrew Boulle, IeDEA-Southern Africa Collaboration (2014) Mortality among adults transferred and lost to follow-up from antiretroviral therapy programmes in South Africa: a multicenter cohort study., Journal of acquired immune deficiency syndromes (1999) 67(2), p. e67-75, url, doi:10.1097/QAI.0000000000000269

Mary-Ann Davies, Emma Kalk (2014) Provider-initiated HIV testing and counselling for children., PLoS medicine 11(5), p. e1001650, url, doi:10.1371/journal.pmed.1001650

Eugene T Richardson, Carl D Morrow, Darryl B Kalil, Samuel Ginsberg, Linda-Gail Bekker, Robin Wood (2014) Shared air: a renewed focus on ventilation for the prevention of tuberculosis transmission., PloS one 9(5), Steven J. Drews (ed.), p. e96334, url, doi:10.1371/journal.pone.0096334

Julia Bohlius, Fabio Valeri, Mhairi Maskew, Hans Prozesky, Daniela Garone, Mazvita Sengayi, Matthew P Fox, Mary-Ann Davies, Matthias Egger (2014) Kaposi's Sarcoma in HIV-infected patients in South Africa: Multicohort study in the antiretroviral therapy era., International journal of cancer 135(11), p. 2644-52, url, doi:10.1002/ijc.28894

Nello Blaser, Celina Wettstein, Janne Estill, Luisa Salazar Vizcaya, Gilles Wandeler, Matthias Egger, Olivia Keiser (2014) Impact of viral load and the duration of primary infection on HIV transmission: systematic review and meta-analysis., AIDS (London, England) 28(7), p. 1021-9, url, doi:10.1097/QAD.0000000000000135

Lyson Tenthani, Andreas D Haas, Hannock Tweya, Andreas Jahn, Joep J van Oosterhout, Frank Chimbwandira, Zengani Chirwa, Wingston Ng'ambi, Alan Bakali, Sam Phiri, Landon Myer, Fabio Valeri, Marcel Zwahlen, Gilles Wandeler, Olivia Keiser, Ministry of Health in Malawi and IeDEA Southern Africa (2014) Retention in care under universal antiretroviral therapy for HIV-infected pregnant and breastfeeding women ('Option B+') in Malawi., AIDS (London, England) 28(4), p. 589-98, url, doi:10.1097/QAD.0000000000000143

Eliane Rohner, Natascha Wyss, Sven Trelle, Sam M Mbulaiteye, Matthias Egger, Urban Novak, Marcel Zwahlen, Julia Bohlius (2014) HHV-8 seroprevalence: a global view., Systematic reviews 3(1), p. 11, url, doi:10.1186/2046-4053-3-11

Karl-Günter Technau, Michael Schomaker, Louise Kuhn, Harry Moultrie, Ashraf Coovadia, Brian Eley, Helena Rabie, Robin Wood, Vivian Cox, Luisa Salazar Vizcaya, Evans Muchiri, Mary-Ann Davies, IeDEA Southern Africa Paediatric Collaboration (2014) Virologic response in children treated with abacavir-compared with stavudine-based antiretroviral treatment: a South African multi-cohort analysis., The Pediatric infectious disease journal 33(6), p. 617-22, url, doi:10.1097/INF.0000000000000222

Mary-Ann Davies, Margaret May, Carolyn Bolton-Moore, Cleophas Chimbetete, Brian Eley, Daniela Garone, Janet Giddy, Harry Moultrie, James Ndirangu, Sam Phiri, Helena Rabie, Karl-Günter Technau, Robin Wood, Andrew Boulle, Matthias Egger, Olivia Keiser, IeDEA Southern Africa Collaboration (2014) Prognosis of children with HIV-1 infection starting antiretroviral therapy in Southern Africa: a collaborative analysis of treatment programs., The Pediatric infectious disease journal 33(6), p. 608-16, url, doi:10.1097/INF.0000000000000214

Matthias IeDEA and ART Cohort Collaborations, Dorita Avila, Keri N Althoff, Catrina Mugglin, Kara Wools-Kaloustian, Manuel Koller, François Dabis, Denis Nash, Thomas Gsponer, Somnuek Sungkanuparph, Catherine McGowan, Margaret May, David Cooper, Cleophas Chimbetete, Marcelo Wolff, Ann Collier, Hamish McManus, Mary-Ann Davies, Dominique Costagliola, Brenda Crabtree-Ramirez, Romanee Chaiwarith, Angela Cescon, Morna Cornell, Lameck Diero, Praphan Phanuphak, Adrien Sawadogo, Jochen Ehmer, Serge P Eholie, Patrick C K Li, Matthew P Fox, Neel R Gandhi, Elsa González, Christopher K C Lee, Christopher J Hoffmann, Andrew Kambugu, Olivia Keiser, Rossana Ditangco, Hans Prozesky, Fiona Lampe, Nagalingeswaran Kumarasamy, Mari Kitahata, Emmanuel Lugina, Rita Lyamuya, Saphonn Vonthanak, Valeria Fink, Antonella d'Arminio Monforte, Paula Mendes Luz, Yi-Ming A Chen, Albert Minga, Jordi Casabona, Albert Mwango, Jun Y Choi, Marie-Louise Newell, Elizabeth A Bukusi, Kapella Ngonyani, Tuti P Merati, Juliana Otieno, Mwebesa B Bosco, Sam Phiri, Oon T Ng, Kathryn Anastos, Jürgen Rockstroh, Ignacio Santos, Shinichi Oka, Geoffrey Somi, Christoph Stephan, Ramon Teira, Deo Wabwire, Gilles Wandeler, Andrew Boulle, Peter Reiss, Robin Wood, Benjamin H Chi, Carolyn Williams, Jonathan A Sterne, Matthias Egger (2014) Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries., Journal of acquired immune deficiency syndromes (1999) 65(1), p. e8-16, url, doi:10.1097/QAI.0b013e3182a39979

Janne Estill, Hannock Tweya, Matthias Egger, Gilles Wandeler, Caryl Feldacker, Leigh F Johnson, Nello Blaser, Luisa Salazar Vizcaya, Sam Phiri, Olivia Keiser (2014) Tracing of patients lost to follow-up and HIV transmission: mathematical modeling study based on 2 large ART programs in Malawi., Journal of acquired immune deficiency syndromes (1999) 65(5), p. e179-86, url, doi:10.1097/QAI.0000000000000075

Gilles Wandeler, Florian Gerber, Julia Rohr, Benjamin H Chi, Catherine Orrell, Cleophas Chimbetete, Hans Prozesky, Andrew Boulle, Christopher J Hoffmann, Thomas Gsponer, Matthew P Fox, Marcel Zwahlen, Matthias Egger, IeDEA Southern Africa (2014) Tenofovir or zidovudine in second-line antiretroviral therapy after stavudine failure in southern Africa., Antiviral therapy 19(5), p. 521-5, url, doi:10.3851/IMP2710

M Schomaker, T Gsponer, J Estill, M Fox, A Boulle (2014) Non-ignorable loss to follow-up: correcting mortality estimates based on additional outcome ascertainment., Statistics in medicine 33(1), p. 129-42, url, doi:10.1002/sim.5912

Leigh F Johnson, Janne Estill, Olivia Keiser, Morna Cornell, Haroon Moolla, Michael Schomaker, Anna Grimsrud, Mary-Ann Davies, Andrew Boulle (2014) Do increasing rates of loss to follow-up in antiretroviral treatment programs imply deteriorating patient retention?, American journal of epidemiology 180(12), p. 1208-12, url, doi:10.1093/aje/kwu295

Jason R Andrews, Carl Morrow, Rochelle P Walensky, Robin Wood (2014) Integrating social contact and environmental data in evaluating tuberculosis transmission in a South African township., The Journal of infectious diseases 210(4), p. 597-603, url, doi:10.1093/infdis/jiu138

Lloyd Mulenga, Patrick Musonda, Albert Mwango, Michael J Vinikoor, Mary-Ann Davies, Aggrey Mweemba, Alexandra Calmy, Jeffrey S Stringer, Olivia Keiser, Benjamin H Chi, Gilles Wandeler, IeDEA-Southern Africa (2014) Effect of baseline renal function on tenofovir-containing antiretroviral therapy outcomes in Zambia., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 58(10), p. 1473-80, url, doi:10.1093/cid/ciu117

Maya Petersen, Joshua Schwab, Susan Gruber, Nello Blaser, Michael Schomaker, Mark van der Laan (2014) Targeted Maximum Likelihood Estimation for Dynamic and Static Longitudinal Marginal Structural Working Models., Journal of causal inference 2(2), p. 147-185, pubmed, doi:10.1515/jci-2013-0007

Stephany N Duda, Amanda M Farr, Mary Lou Lindegren, Meridith Blevins, C William Wester, Kara Wools-Kaloustian, Didier K Ekouevi, Matthias Egger, Jennifer Hemingway-Foday, David A Cooper, Richard D Moore, Catherine C McGowan, Denis Nash, International Epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration (2014) Characteristics and comprehensiveness of adult HIV care and treatment programmes in Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration., Journal of the International AIDS Society 17, p. 19045, pubmed

Luisa Salazar-Vizcaya, Olivia Keiser, Karl Technau, Mary-Ann Davies, Andreas D Haas, Nello Blaser, Vivian Cox, Brian Eley, Helena Rabie, Harry Moultrie, Janet Giddy, Robin Wood, Matthias Egger, Janne Estill (2014) Viral load versus CD4⁺ monitoring and 5-year outcomes of antiretroviral therapy in HIV-positive children in Southern Africa: a cohort-based modelling study., AIDS (London, England) 28(16), p. 2451-60, pubmed

2013

Mary-Ann Davies, Sam Phiri, Robin Wood, Maureen Wellington, Vivian Cox, Carolyn Bolton-Moore, Venessa Timmerman, Harry Moultrie, James Ndirangu, Helena Rabie, Karl Technau, Janet Giddy, Nicola Maxwell, Andrew Boulle, Olivia Keiser, Matthias Egger, Brian Eley, IeDEA Southern Africa Steering Group (2013) Temporal trends in the characteristics of children at antiretroviral therapy initiation in southern Africa: the IeDEA-SA Collaboration., PloS one 8(12), Eduard J. Beck (ed.), p. e81037, url, doi:10.1371/journal.pone.0081037

Olivia Keiser, Motlalepula Sello, Thabo Ishmael Lejone, Karolin Pfeiffer, Mary-Ann Davies, Matthias Egger, Jochen Ehmer (2013) Outcomes of antiretroviral treatment programmes in rural Lesotho: health centres and hospitals compared, Journal of the International AIDS Society 16(1), url, doi:10.7448/IAS.16.1.18616

Michael Schomaker, Matthias Egger, James Ndirangu, Sam Phiri, Harry Moultrie, Karl Technau, Vivian Cox, Janet Giddy, Cleophas Chimbetete, Robin Wood, Thomas Gsponer, Carolyn Bolton Moore, Helena Rabie, Brian Eley, Lulu Muhe, Martina Penazzato, Shaffiq Essajee, Olivia Keiser, Mary-Ann Davies, International Epidemiologic Databases to Evaluate AIDS–Southern Africa (IeDEA-SA) Collaboration (2013) When to start antiretroviral therapy in children aged 2-5 years: a collaborative causal modelling analysis of cohort studies from southern Africa., PLoS medicine 10(11), Steven G. Deeks (ed.), p. e1001555, url, doi:10.1371/journal.pmed.1001555

Lukas Fenner, Marie Ballif, Claire Graber, Venerandah Nhandu, Jean Claude Dusingize, Claudia P Cortes, Gabriela Carriquiry, Kathryn Anastos, Daniela Garone, Eefje Jong, Joachim Charles Gnokoro, Omar Sued, Samuel Ajayi, Lameck Diero, Kara Wools-Kaloustian, Sasisopin Kiertiburanakul, Barbara Castelnuovo, Charlotte Lewden, Nicolas Durier, Timothy R Sterling, Matthias Egger, International epidemiological Databases to Evaluate AIDS (IeDEA) (2013) Tuberculosis in antiretroviral treatment programs in lower income countries: availability and use of diagnostics and screening., PloS one 8(10), Pere-Joan Cardona (ed.), p. e77697, url, doi:10.1371/journal.pone.0077697

Morna Cornell, Landon Myer (2013) Moving beyond gender stereotypes., Lancet (London, England) 382(9891), p. 506, url, doi:10.1016/S0140-6736(13)61713-4

Nandi Siegfried, Mary-Ann Davies, Martina Penazzato, Lulu M Muhe, Matthias Egger (2013) Optimal time for initiating antiretroviral therapy (ART) in HIV-infected, treatment-naive children aged 2 to 5 years old., The Cochrane database of systematic reviews(10), Nandi Siegfried (ed.), p. CD010309, Chichester, UK: John Wiley & Sons, Ltd, url, doi:10.1002/14651858.CD010309.pub2

Andrew D Kerkhoff, Robin Wood, David M Lowe, Monica Vogt, Stephen D Lawn (2013) Blood neutrophil counts in HIV-infected patients with pulmonary tuberculosis: association with sputum mycobacterial load., PloS one 8(7), Pere-Joan Cardona (ed.), p. e67956, url, doi:10.1371/journal.pone.0067956

Karl-Günter Technau, Erica Lazarus, Louise Kuhn, Elaine J Abrams, Gillian Sorour, Renate Strehlau, Gary Reubenson, Mary-Ann Davies, Ashraf Coovadia (2013) Poor early virologic performance and durability of abacavir-based first-line regimens for HIV-infected children., The Pediatric infectious disease journal 32(8), p. 851-5, url, doi:10.1097/INF.0b013e31828c3738

Ankur Gupta-Wright, Robin Wood, Linda-Gail Bekker, Stephen D Lawn (2013) Temporal association between incident tuberculosis and poor virological outcomes in a South African antiretroviral treatment service., Journal of acquired immune deficiency syndromes (1999) 64(3), p. 261-70, url, doi:10.1097/QAI.0b013e3182a23e9a

Niklaus Daniel Labhardt, Olivia Keiser, Motlalepula Sello, Thabo Ishmael Lejone, Karolin Pfeiffer, Mary-Ann Davies, Matthias Egger, Jochen Ehmer, Gilles Wandeler, SolidarMed ART Program and IeDEA-Southern Africa (2013) Outcomes of antiretroviral treatment programmes in rural Lesotho: health centres and hospitals compared., Journal of the International AIDS Society 16, p. 18616, pubmed

Helen M McIlleron, Michael Schomaker, Yuan Ren, Phumla Sinxadi, James J C Nuttall, Hermien Gous, Harry Moultrie, Brian Eley, Concepta Merry, Peter Smith, David W Haas, Gary Maartens (2013) Effects of rifampin-based antituberculosis therapy on plasma efavirenz concentrations in children vary by CYP2B6 genotype., AIDS (London, England) 27(12), p. 1933-40, pubmed

M Cornell (2013) Gender inequality: Bad for men's health., Southern African journal of HIV medicine 14(1), p. 12-14, pubmed, doi:10.7196/SAJHIVMED.894

R K Gupta, S D Lawn, L-G Bekker, J Caldwell, R Kaplan, R Wood (2013) Impact of human immunodeficiency virus and CD4 count on tuberculosis diagnosis: analysis of city-wide data from Cape Town, South Africa., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 17(8), p. 1014-22, url, doi:10.5588/ijtld.13.0032

Anna Thora Grimsrud, Morna Cornell, Matthias Egger, Andrew Boulle, Landon Myer (2013) Impact of definitions of loss to follow-up (LTFU) in antiretroviral therapy program evaluation: variation in the definition can have an appreciable impact on estimated proportions of LTFU., Journal of clinical epidemiology 66(9), p. 1006-13, url, doi:10.1016/j.jclinepi.2013.03.013

Mhairi Maskew, Matthew P Fox, Gilles van Cutsem, Kathryn Chu, Patrick Macphail, Andrew Boulle, Matthias Egger, For Iedea Southern Africa (2013) Treatment response and mortality among patients starting antiretroviral therapy with and without Kaposi sarcoma: a cohort study., PloS one 8(6), Thomas F. Schulz (ed.), p. e64392, url, doi:10.1371/journal.pone.0064392

Morna Cornell, Landon Myer (2013) Men and mortality: sex inequality in health outcomes., AIDS (London, England) 27(5), p. 849-50, url, doi:10.1097/QAD.0b013e32835e399b

Andreas E Stuck, Lyson Tenthani, Matthias Egger (2013) Assessing population aging and disability in sub-Saharan Africa: lessons from Malawi?, PLoS medicine 10(5), p. e1001441, url, doi:10.1371/journal.pmed.1001441

Sophia Pathai, Stephen D Lawn, Clare E Gilbert, Dagmara McGuinness, Liane McGlynn, Helen A Weiss, Jennifer Port, Theresa Christ, Karen Barclay, Robin Wood, Linda-Gail Bekker, Paul G Shiels (2013) Accelerated biological ageing in HIV-infected individuals in South Africa: a case-control study., AIDS (London, England) 27(15), p. 2375-84, url, doi:10.1097/QAD.0b013e328363bf7f

Gilles Wandeler, Thomas Gsponer, Lloyd Mulenga, Daniela Garone, Robin Wood, Mhairi Maskew, Hans Prozesky, Christopher Hoffmann, Jochen Ehmer, Diana Dickinson, Mary-Ann Davies, Matthias Egger, Olivia Keiser, IeDEA Southern Africa Collaboration (2013) Zidovudine impairs immunological recovery on first-line antiretroviral therapy: collaborative analysis of cohort studies in southern Africa., AIDS (London, England) 27(14), p. 2225-32, url, doi:10.1097/QAD.0b013e328362d887

Andrew Anglemyer, George W Rutherford, Tara Horvath, Rachel C Baggaley, Matthias Egger, Nandi Siegfried (2013) Antiretroviral therapy for prevention of HIV transmission in HIV-discordant couples., The Cochrane database of systematic reviews(4), George W Rutherford (ed.), p. CD009153, Chichester, UK: John Wiley & Sons, Ltd, url, doi:10.1002/14651858.CD009153.pub3

Mhairi Maskew, A Patrick MacPhail, Denise Whitby, Matthias Egger, Matthew P Fox (2013) Kaposi sarcoma-associated herpes virus and response to antiretroviral therapy: a prospective study of HIV-infected adults., Journal of acquired immune deficiency syndromes (1999) 63(4), p. 442-8, url, doi:10.1097/QAI.0b013e3182969cc1

Katharina Kranzer, Stephen D Lawn, Leigh F Johnson, Linda-Gail Bekker, Robin Wood (2013) Community viral load and CD4 count distribution among people living with HIV in a South African Township: implications for treatment as prevention., Journal of acquired immune deficiency syndromes (1999) 63(4), p. 498-505, url, doi:10.1097/QAI.0b013e318293ae48

S D Lawn, A D Kerkhoff, M Vogt, R Wood (2013) Diagnostic and prognostic value of serum C-reactive protein for screening for HIV-associated tuberculosis., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 17(5), p. 636-43, url, doi:10.5588/ijtld.12.0811

Leigh F Johnson, Joel Mossong, Rob E Dorrington, Michael Schomaker, Christopher J Hoffmann, Olivia Keiser, Matthew P Fox, Robin Wood, Hans Prozesky, Janet Giddy, Daniela Belen Garone, Morna Cornell, Matthias Egger, Andrew Boulle, International Epidemiologic Databases to Evaluate AIDS Southern Africa Collaboration (2013) Life expectancies of South African adults starting antiretroviral treatment: collaborative analysis of cohort studies., PLoS medicine 10(4), David D. Celentano (ed.), p. e1001418, url, doi:10.1371/journal.pmed.1001418

Lukas Fenner, Matthias Egger, Thomas Bodmer, Hansjakob Furrer, Marie Ballif, Manuel Battegay, Peter Helbling, Jan Fehr, Thomas Gsponer, Hans L Rieder, Marcel Zwahlen, Matthias Hoffmann, Enos Bernasconi, Matthias Cavassini, Alexandra Calmy, Marisa Dolina, Reno Frei, Jean-Paul Janssens, Sonia Borrell, David Stucki, Jacques Schrenzel, Erik C Böttger, Sebastien Gagneux, Swiss HIV Cohort and Molecular Epidemiology of Tuberculosis Study Groups (2013) HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis., PLoS genetics 9(3), Greg Gibson (ed.), p. e1003318, url, doi:10.1371/journal.pgen.1003318

Mweete D Nglazi, Richard Kaplan, Catherine Orrell, Landon Myer, Robin Wood, Linda-Gail Bekker, Stephen D Lawn (2013) Increasing transfers-out from an antiretroviral treatment service in South Africa: patient characteristics and rates of virological non-suppression., PloS one 8(3), Matthew P. Fox (ed.), p. e57907, url, doi:10.1371/journal.pone.0057907

Janne Estill, Matthias Egger, Nello Blaser, Luisa Salazar Vizcaya, Daniela Garone, Robin Wood, Jennifer Campbell, Timothy B Hallett, Olivia Keiser, IeDEA Southern Africa (2013) Cost-effectiveness of point-of-care viral load monitoring of antiretroviral therapy in resource-limited settings: mathematical modelling study., AIDS (London, England) 27(9), p. 1483-92, url, doi:10.1097/QAD.0b013e328360a4e5

Janne Estill, Matthias Egger, Leigh F Johnson, Thomas Gsponer, Gilles Wandeler, Mary-Ann Davies, Andrew Boulle, Robin Wood, Daniela Garone, Jeffrey S A Stringer, Timothy B Hallett, Olivia Keiser, IeDEA Southern Africa Collaboration (2013) Monitoring of antiretroviral therapy and mortality in HIV programmes in Malawi, South Africa and Zambia: mathematical modelling study., PloS one 8(2), Alain Barrat (ed.), p. e57611, url, doi:10.1371/journal.pone.0057611

Hannock Tweya, Caryl Feldacker, Sam Phiri, Anne Ben-Smith, Lukas Fenner, Andreas Jahn, Mike Kalulu, Ralf Weigel, Chancy Kamba, Rabecca Banda, Matthias Egger, Olivia Keiser (2013) Comparison of treatment outcomes of new smear-positive pulmonary tuberculosis patients by HIV and antiretroviral status in a TB/HIV clinic, Malawi., PloS one 8(2), Wenzhe Ho (ed.), p. e56248, url, doi:10.1371/journal.pone.0056248

Catrina Mugglin, Gilles Wandeler, Janne Estill, Matthias Egger, Nicole Bender, Mary-Ann Davies, Olivia Keiser (2013) Retention in care of HIV-infected children from HIV test to start of antiretroviral therapy: systematic review., PloS one 8(2), Katharina Kranzer (ed.), p. e56446, url, doi:10.1371/journal.pone.0056446

Miguel Angel Luque-Fernandez, Gilles Van Cutsem, Eric Goemaere, Katherine Hilderbrand, Michael Schomaker, Nompumelelo Mantangana, Shaheed Mathee, Vuyiseka Dubula, Nathan Ford, Miguel A Hernán, Andrew Boulle (2013) Effectiveness of patient adherence groups as a model of care for stable patients on antiretroviral therapy in Khayelitsha, Cape Town, South Africa., PloS one 8(2), David W. Dowdy (ed.), p. e56088, url, doi:10.1371/journal.pone.0056088

Ankur Gupta, Robin Wood, Richard Kaplan, Linda-Gail Bekker, Stephen D Lawn (2013) Prevalent and incident tuberculosis are independent risk factors for mortality among patients accessing antiretroviral therapy in South Africa., PloS one 8(2), Michael Alan Polis (ed.), p. e55824, url, doi:10.1371/journal.pone.0055824

Christopher J Hoffmann, Michael Schomaker, Matthew P Fox, Portia Mutevedzi, Janet Giddy, Hans Prozesky, Robin Wood, Daniela B Garone, Matthias Egger, Andrew Boulle, IeDEA Southern Africa Collaboration (2013) CD4 count slope and mortality in HIV-infected patients on antiretroviral therapy: multicohort analysis from South Africa., Journal of acquired immune deficiency syndromes (1999) 63(1), p. 34-41, url, doi:10.1097/QAI.0b013e318287c1fe

Michael Schomaker, Matthias Egger, Mhairi Maskew, Daniela Garone, Hans Prozesky, Christopher J Hoffmann, Andrew Boulle, Lukas Fenner, IeDEA Southern Africa (2013) Immune recovery after starting ART in HIV-infected patients presenting and not presenting with tuberculosis in South Africa., Journal of acquired immune deficiency syndromes (1999) 63(1), p. 142-5, url, doi:10.1097/QAI.0b013e318288b39d

(2013) A survey of paediatric HIV programmatic and clinical management practices in Asia and sub-Saharan Africa?the International epidemiologic Databases to Evaluate AIDS (IeDEA), Journal of the International AIDS Society 16(1), url, doi:10.7448/IAS.16.1.17998

Morna Cornell, Landon Myer (2013) Does the success of HIV treatment depend on gender?, Future microbiology 8(1), p. 9-11, url, doi:10.2217/fmb.12.128

Lukas Fenner, Stewart E Reid, Matthew P Fox, Daniela Garone, Maureen Wellington, Hans Prozesky, Marcel Zwahlen, Michael Schomaker, Gilles Wandeler, Nzali Kancheya, Andrew Boulle, Robin Wood, German Henostroza, Matthias Egger, IeDEA Southern Africa (2013) Tuberculosis and the risk of opportunistic infections and cancers in HIV-infected patients starting ART in Southern Africa., Tropical medicine & international health : TM & IH 18(2), p. 194-8, url, doi:10.1111/tmi.12026

Valeriane Leroy, Karen Malateste, Helena Rabie, Pagakrong Lumbiganon, Samuel Ayaya, Fatoumata Dicko, Mary-Ann Davies, Azar Kariminia, Kara Wools-Kaloustian, Edmond Aka, Samuel Phiri, Linda Aurpibul, Constantin Yiannoutsos, Haby Signaté-Sy, Lynne Mofenson, François Dabis, International IeDEA Pediatric Working Group1 (2013) Outcomes of antiretroviral therapy in children in Asia and Africa: a comparative analysis of the IeDEA pediatric multiregional collaboration., Journal of acquired immune deficiency syndromes (1999) 62(2), p. 208-19, url, doi:10.1097/QAI.0b013e31827b70bf

IeDEA Pediatric Working Group (2013) A survey of paediatric HIV programmatic and clinical management practices in Asia and sub-Saharan Africa--the International epidemiologic Databases to Evaluate AIDS (IeDEA)., Journal of the International AIDS Society 16, p. 17998, pubmed

2012

Mweete Debra Nglazi, Richard Kaplan, Judy Caldwell, Neshaan Peton, Stephen D Lawn, Robin Wood, Linda-Gail Bekker (2012) Antiretroviral treatment uptake in patients with HIV-associated TB attending co-located TB and ART services, South African Medical Journal 102(12), p. 936, url, doi:10.7196/SAMJ.6024

Constantin Theodore Yiannoutsos, Leigh Francis Johnson, Andrew Boulle, Beverly Sue Musick, Thomas Gsponer, Eric Balestre, Matthew Law, Bryan E Shepherd, Matthias Egger, International Epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration (2012) Estimated mortality of adult HIV-infected patients starting treatment with combination antiretroviral therapy., Sexually transmitted infections 88 Suppl 2(Suppl 2), p. i33-43, url, doi:10.1136/sextrans-2012-050658

Bijaya Malla, David Stucki, Sonia Borrell, Julia Feldmann, Bhagwan Maharjan, Bhawana Shrestha, Lukas Fenner, Sebastien Gagneux (2012) First insights into the phylogenetic diversity of Mycobacterium tuberculosis in Nepal., PloS one 7(12), Christophe Sola (ed.), p. e52297, url, doi:10.1371/journal.pone.0052297

Catrina Mugglin, Janne Estill, Gilles Wandeler, Nicole Bender, Matthias Egger, Thomas Gsponer, Olivia Keiser, IeDEA Southern Africa (2012) Loss to programme between HIV diagnosis and initiation of antiretroviral therapy in sub-Saharan Africa: systematic review and meta-analysis., Tropical medicine & international health : TM & IH 17(12), p. 1509-20, url, doi:10.1111/j.1365-3156.2012.03089.x

Thomas Gsponer, Ralf Weigel, Mary-Ann Davies, Carolyn Bolton, Harry Moultrie, Paula Vaz, Helena Rabie, Karl Technau, James Ndirangu, Brian Eley, Daniela Garone, Maureen Wellington, Janet Giddy, Jochen Ehmer, Matthias Egger, Olivia Keiser, IeDEA Southern Africa (2012) Variability of growth in children starting antiretroviral treatment in southern Africa., Pediatrics 130(4), p. e966-77, url, doi:10.1542/peds.2011-3020

Mary-Ann Davies, Andrew Boulle, Karl Technau, Brian Eley, Harry Moultrie, Helena Rabie, Daniela Garone, Janet Giddy, Robin Wood, Matthias Egger, Olivia Keiser, IeDEA Southern Africa Collaboration (2012) The role of targeted viral load testing in diagnosing virological failure in children on antiretroviral therapy with immunological failure., Tropical medicine & international health : TM & IH 17(11), p. 1386-90, url, doi:10.1111/j.1365-3156.2012.03073.x

Celina Wettstein, Catrina Mugglin, Matthias Egger, Nello Blaser, Luisa S Vizcaya, Janne Estill, Nicole Bender, Mary-Ann Davies, Gilles Wandeler, Olivia Keiser, IeDEA Southern Africa Collaboration (2012) Missed opportunities to prevent mother-to-child-transmission: systematic review and meta-analysis., AIDS (London, England) 26(18), p. 2361-73, url, doi:10.1097/QAD.0b013e328359ab0c

Katharina Kranzer, Stephen D Lawn, Gesine Meyer-Rath, Anna Vassall, Eudoxia Raditlhalo, Darshini Govindasamy, Nienke van Schaik, Robin Wood, Linda-Gail Bekker (2012) Feasibility, yield, and cost of active tuberculosis case finding linked to a mobile HIV service in Cape Town, South Africa: a cross-sectional study., PLoS medicine 9(8), Madhukar Pai (ed.), p. e1001281, url, doi:10.1371/journal.pmed.1001281

Stephen D Lawn, Ankur Gupta, Robin Wood (2012) Assessing the impact of prevalent tuberculosis on mortality among antiretroviral treatment initiators: accurate tuberculosis diagnosis is essential., AIDS (London, England) 26(13), p. 1730-1; author reply 1728-9, url, doi:10.1097/QAD.0b013e3283565ebe

Robin Wood, Stephen D Lawn (2012) Challenges facing lipoarabinomannan urine antigen tests for diagnosing HIV-associated tuberculosis., Expert review of molecular diagnostics 12(6), p. 549-51, url, doi:10.1586/erm.12.52

C Feldacker, H Tweya, O Keiser, R Weigel, M Kalulu, L Fenner, M Egger, E Manda, J B Mwafilaso, C Kamba, S Phiri (2012) Characteristics of adults and children diagnosed with tuberculosis in Lilongwe, Malawi: findings from an integrated HIV/TB clinic., Tropical medicine & international health : TM & IH 17(9), p. 1108-16, url, doi:10.1111/j.1365-3156.2012.03041.x

Stephen D Lawn, Robin Wood (2012) Short-course untargeted isoniazid preventive therapy in South Africa: time to rethink policy?, The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 16(8), p. 995-6, url, doi:10.5588/ijtld.12.0364

Robin Wood, Kimberly Racow, Linda-Gail Bekker, Carl Morrow, Keren Middelkoop, Daniella Mark, Stephen D Lawn (2012) Indoor social networks in a South African township: potential contribution of location to tuberculosis transmission., PloS one 7(6), Patrick Tang (ed.), p. e39246, url, doi:10.1371/journal.pone.0039246

Stephen D Lawn, Anthony D Harries, Graeme Meintjes, Haileyesus Getahun, Diane V Havlir, Robin Wood (2012) Reducing deaths from tuberculosis in antiretroviral treatment programmes in sub-Saharan Africa., AIDS (London, England) 26(17), p. 2121-33, url, doi:10.1097/QAD.0b013e3283565dd1

Alexandra Calmy, Eric Balestre, Fabrice Bonnet, Andrew Boulle, Eduardo Sprinz, Robin Wood, Eric Delaporte, Eugène Messou, James McIntyre, Kamal Marhoum El Filali, Mauro Schechter, N Kumarasamy, David Bangsberg, Patrick McPhail, Stefaan Van Der Borght, Carlos Zala, Matthias Egger, Rodolphe Thiébaut, François Dabis, T-LINC of IeDEA Collaboration (Asia, South America, East, Southern and West Africa) (2012) Mean CD4 cell count changes in patients failing a first-line antiretroviral therapy in resource-limited settings., BMC infectious diseases 12(1), p. 147, url, doi:10.1186/1471-2334-12-147

Lukas Fenner, Sebastien Gagneux, Jean-Paul Janssens, Jan Fehr, Matthias Cavassini, Matthias Hoffmann, Enos Bernasconi, Jacques Schrenzel, Thomas Bodmer, Erik C Böttger, Peter Helbling, Matthias Egger, Swiss HIV Cohort and Molecular Epidemiology of Tuberculosis Study Groups (2012) Tuberculosis in HIV-negative and HIV-infected patients in a low-incidence country: clinical characteristics and treatment outcomes., PloS one 7(3), Michael Alan Polis (ed.), p. e34186, url, doi:10.1371/journal.pone.0034186

Matthew P Fox, Gilles Van Cutsem, Janet Giddy, Mhairi Maskew, Olivia Keiser, Hans Prozesky, Robin Wood, Miguel A Hernán, Jonathan A C Sterne, Matthias Egger, Andrew Boulle, IeDEA-SA collaboration (2012) Rates and predictors of failure of first-line antiretroviral therapy and switch to second-line ART in South Africa., Journal of acquired immune deficiency syndromes (1999) 60(4), p. 428-37, url, doi:10.1097/QAI.0b013e3182557785

Janne Estill, Cindy Aubrière, Matthias Egger, Leigh Johnson, Robin Wood, Daniela Garone, Thomas Gsponer, Gilles Wandeler, Andrew Boulle, Mary-Ann Davies, Timothy B Hallett, Olivia Keiser, IeDEA Southern Africa (2012) Viral load monitoring of antiretroviral therapy, cohort viral load and HIV transmission in Southern Africa: a mathematical modelling analysis., AIDS (London, England) 26(11), p. 1403-13, url, doi:10.1097/QAD.0b013e3283536988

Mweete Debra Nglazi, Richard Kaplan, Judy Caldwell, Neshaan Peton, Stephen D Lawn, Robin Wood, Linda-Gail Bekker (2012) Antiretroviral treatment uptake in patients with HIV-associated TB attending co-located TB and ART services., South African medical journal = Suid-Afrikaanse tydskrif vir geneeskunde 102(12), p. 936-9, pubmed

Gilles Wandeler, Olivia Keiser, Lloyd Mulenga, Christopher J Hoffmann, Robin Wood, Thom Chaweza, Alana Brennan, Hans Prozesky, Daniela Garone, Janet Giddy, Cleophas Chimbetete, Andrew Boulle, Matthias Egger, IeDEA Southern Africa Collaboration (2012) Tenofovir in second-line ART in Zambia and South Africa: collaborative analysis of cohort studies., Journal of acquired immune deficiency syndromes (1999) 61(1), p. 41-8, pubmed, doi:10.1097/QAI.0b013e3182632540

Jialun Zhou, Antoine Jaquet, Emmanuel Bissagnene, Beverly Musick, Kara Wools-Kaloustian, Nicola Maxwell, Andrew Boulle, Firas Wehbe, Daniel Masys, Jeniffer Iriondo-Perez, Jay Hemingway-Foday, Matthew Law, Western Africa, Eastern Africa, Southern Africa, Caribbean and Central and South America, and Asia Pacific Regions of the International Epidemiologic Databases to Evaluate AIDS-IeDEA (2012) Short-term risk of anaemia following initiation of combination antiretroviral treatment in HIV-infected patients in countries in sub-Saharan Africa, Asia-Pacific, and central and South America., Journal of the International AIDS Society 15(1), p. 5, url, doi:10.1186/1758-2652-15-5

Morna Cornell, Michael Schomaker, Daniela Belen Garone, Janet Giddy, Christopher J Hoffmann, Richard Lessells, Mhairi Maskew, Hans Prozesky, Robin Wood, Leigh F Johnson, Matthias Egger, Andrew Boulle, Landon Myer, International Epidemiologic Databases to Evaluate AIDS Southern Africa Collaboration (2012) Gender differences in survival among adult patients starting antiretroviral therapy in South Africa: a multicentre cohort study., PLoS medicine 9(9), p. e1001304, pubmed, doi:10.1371/journal.pmed.1001304

Lukas Fenner, Matthias Egger, Thomas Bodmer, Ekkehardt Altpeter, Marcel Zwahlen, Katia Jaton, Gaby E Pfyffer, Sonia Borrell, Olivier Dubuis, Thomas Bruderer, Hans H Siegrist, Hansjakob Furrer, Alexandra Calmy, Jan Fehr, Jesica Mazza Stalder, Béatrice Ninet, Erik C Böttger, Sebastien Gagneux, Swiss HIV Cohort Study and the Swiss Molecular Epidemiology of Tuberculosis Study Group (2012) Effect of mutation and genetic background on drug resistance in Mycobacterium tuberculosis., Antimicrobial agents and chemotherapy 56(6), p. 3047-53, url, doi:10.1128/AAC.06460-11

Carl Morrow, Alison Munro, Marisa Wilke, Ruth Stark, Robin Wood (2012) Remote sensing of HIV care programmes using centrally collected laboratory results: can we monitor ART programme effectiveness?, South African medical journal = Suid-Afrikaanse tydskrif vir geneeskunde 102(6), p. 501-5, pubmed

Ralf Weigel, Janne Estill, Matthias Egger, Anthony D Harries, Simon Makombe, Hannock Tweya, Andreas Jahn, Olivia Keiser (2012) Mortality and loss to follow-up in the first year of ART: Malawi national ART programme., AIDS (London, England) 26(3), p. 365-73, url, doi:10.1097/QAD.0b013e32834ed814

K Kranzer, D Govindasamy, N van Schaik, E Thebus, N Davies, Ma Zimmermann, S Jeneker, Sd Lawn, R Wood, L-G Bekker (2012) Incentivized recruitment of a population sample to a mobile HIV testing service increases the yield of newly diagnosed cases, including those in need of antiretroviral therapy., HIV medicine 13(2), p. 132-7, url, doi:10.1111/j.1468-1293.2011.00947.x

Lukas Fenner, Sebastien Gagneux, Peter Helbling, Manuel Battegay, Hans L Rieder, Gaby E Pfyffer, Marcel Zwahlen, Hansjakob Furrer, Hans H Siegrist, Jan Fehr, Marisa Dolina, Alexandra Calmy, David Stucki, Katia Jaton, Jean-Paul Janssens, Jesica Mazza Stalder, Thomas Bodmer, Beatrice Ninet, Erik C Böttger, Matthias Egger, Swiss HIV Cohort Study Group, Molecular Epidemiology of Tuberculosis Study Group (2012) Mycobacterium tuberculosis transmission in a country with low tuberculosis incidence: role of immigration and HIV infection., Journal of clinical microbiology 50(2), p. 388-95, url, doi:10.1128/JCM.05392-11

Thomas Gsponer, Maya Petersen, Matthias Egger, Sam Phiri, Marloes H Maathuis, Andrew Boulle, Patrick Musondad, Hannock Tweya, Karin Peter, Benjamin H Chi, Olivia Keiser, IeDEA Southern Africa (2012) The causal effect of switching to second-line ART in programmes without access to routine viral load monitoring., AIDS (London, England) 26(1), p. 57-65, url, doi:10.1097/QAD.0b013e32834e1b5f

Gilles Wandeler, Olivia Keiser, Karolin Pfeiffer, Sabrina Pestilli, Christiane Fritz, Niklaus D Labhardt, Franzisco Mbofana, Robert Mudyiradima, Jan Emmel, Matthias Egger, Jochen Ehmer, SolidarMed ART program and IeDEA-Southern Africa (2012) Outcomes of antiretroviral treatment programs in rural Southern Africa., Journal of acquired immune deficiency syndromes (1999) 59(2), p. e9-16, url, doi:10.1097/QAI.0b013e31823edb6a

Matthias Egger, Didier K Ekouevi, Carolyn Williams, Rita Elias Lyamuya, Henri Mukumbi, Paula Braitstein, Tyler Hartwell, Claire Graber, Benjamin H Chi, Andrew Boulle, François Dabis, Kara Wools-Kaloustian (2012) Cohort Profile: the international epidemiological databases to evaluate AIDS (IeDEA) in sub-Saharan Africa., International journal of epidemiology 41(5), p. 1256-64, url, doi:10.1093/ije/dyr080

2011

Franziska Schöni-Affolter, Olivia Keiser, Albert Mwango, Jeffrey Stringer, Bruno Ledergerber, Lloyd Mulenga, Heiner C Bucher, Andrew O Westfall, Alexandra Calmy, Andrew Boulle, Namwinga Chintu, Matthias Egger, Benjamin H Chi, Swiss HIV Cohort Study, IeDEA Southern Africa (2011) Estimating loss to follow-up in HIV-infected patients on antiretroviral therapy: the effect of the competing risk of death in Zambia and Switzerland., PloS one 6(12), Landon Myer (ed.), p. e27919, url, doi:10.1371/journal.pone.0027919

Katharina Kranzer, James J Lewis, Richard G White, Judith R Glynn, Stephen D Lawn, Keren Middelkoop, Linda-Gail Bekker, Robin Wood (2011) Antiretroviral treatment cohort analysis using time-updated CD4 counts: assessment of bias with different analytic methods., PloS one 6(11), Matthew P. Fox (ed.), p. e27763, url, doi:10.1371/journal.pone.0027763

Mhairi Maskew, A Patrick Macphail, Denise Whitby, Matthias Egger, Carole L Wallis, Matthew P Fox (2011) Prevalence and predictors of kaposi sarcoma herpes virus seropositivity: a cross-sectional analysis of HIV-infected adults initiating ART in Johannesburg, South Africa., Infectious agents and cancer 6(1), p. 22, url, doi:10.1186/1750-9378-6-22

Robin Wood, Stephen D Lawn, Judy Caldwell, Richard Kaplan, Keren Middelkoop, Linda-Gail Bekker (2011) Burden of new and recurrent tuberculosis in a major South African city stratified by age and HIV-status., PloS one 6(10), Adithya Cattamanchi (ed.), p. e25098, url, doi:10.1371/journal.pone.0025098

Katharina Kranzer, Nienke van Schaik, Unice Karmue, Keren Middelkoop, Elaine Sebastian, Stephen D Lawn, Robin Wood, Linda-Gail Bekker (2011) High prevalence of self-reported undiagnosed HIV despite high coverage of HIV testing: a cross-sectional population based sero-survey in South Africa., PloS one 6(9), Alan Landay (ed.), p. e25244, url, doi:10.1371/journal.pone.0025244

Benjamin H Chi, Constantin T Yiannoutsos, Andrew O Westfall, Jamie E Newman, Jialun Zhou, Carina Cesar, Martin W G Brinkhof, Albert Mwango, Eric Balestre, Gabriela Carriquiry, Thira Sirisanthana, Henri Mukumbi, Jeffrey N Martin, Anna Grimsrud, Melanie Bacon, Rodolphe Thiebaut, International Epidemiologic Databases to Evaluate AIDS Collaboration (2011) Universal definition of loss to follow-up in HIV treatment programs: a statistical analysis of 111 facilities in Africa, Asia, and Latin America., PLoS medicine 8(10), John Bartlett (ed.), p. e1001111, url, doi:10.1371/journal.pmed.1001111

Stephen D Lawn, Lucy Campbell, Richard Kaplan, Francesca Little, Carl Morrow, Robin Wood, IeDEA-Southern Africa (2011) Delays in starting antiretroviral therapy in patients with HIV-associated tuberculosis accessing non-integrated clinical services in a South African township., BMC infectious diseases 11(1), p. 258, url, doi:10.1186/1471-2334-11-258

Lukas Fenner, Bijaya Malla, Béatrice Ninet, Olivier Dubuis, David Stucki, Sonia Borrell, Thembela Huna, Thomas Bodmer, Matthias Egger, Sebastien Gagneux (2011) Pseudo-Beijing: evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis., PloS one 6(9), Leonardo A. Sechi (ed.), p. e24737, url, doi:10.1371/journal.pone.0024737

Mary-Ann Davies, Andrew Boulle, Brian Eley, Harry Moultrie, Karl Technau, Helena Rabie, Gilles van Cutsem, Janet Giddy, Robin Wood, Matthias Egger, Olivia Keiser, International epidemiologic Databases to Evaluate AIDS Southern Africa (IeDEA‐SA) Collaboration (2011) Accuracy of immunological criteria for identifying virological failure in children on antiretroviral therapy - the IeDEA Southern Africa Collaboration., Tropical medicine & international health : TM & IH 16(11), p. 1367-71, url, doi:10.1111/j.1365-3156.2011.02854.x

L Fenner, M Forster, A Boulle, S Phiri, P Braitstein, C Lewden, M Schechter, N Kumarasamy, M Pascoe, E Sprinz, D R Bangsberg, P S Sow, D Dickinson, M P Fox, J McIntyre, M Khongphatthanayothin, F Dabis, M W G Brinkhof, R Wood, M Egger, ART-LINC of IeDEA (2011) Tuberculosis in HIV programmes in lower-income countries: practices and risk factors., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 15(5), p. 620-7, url, doi:10.5588/ijtld.10.0249

Olivia Keiser, Benjamin H Chi, Thomas Gsponer, Andrew Boulle, Catherine Orrell, Sam Phiri, Nicola Maxwell, Mhairi Maskew, Hans Prozesky, Matthew P Fox, Andrew Westfall, Matthias Egger, IeDEA Southern Africa Collaboration (2011) Outcomes of antiretroviral treatment in programmes with and without routine viral load monitoring in Southern Africa., AIDS (London, England) 25(14), p. 1761-9, url, doi:10.1097/QAD.0b013e328349822f

Stephen D Lawn, Lucy Campbell, Richard Kaplan, Andrew Boulle, Morna Cornell, Bernhard Kerschberger, Carl Morrow, Francesca Little, Matthias Egger, Robin Wood, International Epidemiological Databases to Evaluate AIDS-Southern Africa (2011) Time to initiation of antiretroviral therapy among patients with HIV-associated tuberculosis in Cape Town, South Africa., Journal of acquired immune deficiency syndromes (1999) 57(2), p. 136-40, url, doi:10.1097/QAI.0b013e3182199ee9

Morna Cornell, James McIntyre, Landon Myer (2011) Men and antiretroviral therapy in Africa: our blind spot., Tropical medicine & international health : TM & IH 16(7), p. 828-9, url, doi:10.1111/j.1365-3156.2011.02767.x

Morna Cornell, Anna Grimsrud, Andrew Boulle, Landon Myer (2011) Retention among adults initiating antiretroviral therapy in South Africa: 2002-2007., Journal of acquired immune deficiency syndromes (1999) 56(3), p. e102; author reply e102-3, url, doi:10.1097/QAI.0b013e318202c40e

TREAT Asia Pediatric HIV Observational Database (TApHOD), International Epidemiologic Databases to Evaluate AIDS (IeDEA) Southern Africa Paediatric Group (2011) A biregional survey and review of first-line treatment failure and second-line paediatric antiretroviral access and use in Asia and southern Africa., Journal of the International AIDS Society 14(1), p. 7, url, doi:10.1186/1758-2652-14-7

(2011) A biregional survey and review of first-line treatment failure and second-line pediatric antiretroviral access and use in Asia and southern Africa, Journal of the International AIDS Society 14(1), p. 17, url, doi:10.1186/1758-2652-14-17

Ralf Weigel, Mindy Hochgesang, Martin Wg Brinkhof, Mina C Hosseinipour, Matt Boxshall, Eustice Mhango, Brains Nkwazi, Hannock Tweya, Maggie Kamlaka, Frederick Chagwera, Sam Phiri (2011) Outcomes and associated risk factors of patients traced after being lost to follow-up from antiretroviral treatment in Lilongwe, Malawi., BMC infectious diseases 11(1), p. 31, url, doi:10.1186/1471-2334-11-31

Matthias Egger, Ben D Spycher, John Sidle, Ralf Weigel, Elvin H Geng, Matthew P Fox, Patrick MacPhail, Gilles van Cutsem, Eugène Messou, Robin Wood, Denis Nash, Margaret Pascoe, Diana Dickinson, Jean-François Etard, James A McIntyre, Martin W G Brinkhof, IeDEA East Africa, West Africa and Southern Africa (2011) Correcting mortality for loss to follow-up: a nomogram applied to antiretroviral treatment programmes in sub-Saharan Africa., PLoS medicine 8(1), Gregory P. Bisson (ed.), p. e1000390, url, doi:10.1371/journal.pmed.1000390

Mary-Ann Davies, Harry Moultrie, Brian Eley, Helena Rabie, Gilles Van Cutsem, Janet Giddy, Robin Wood, Karl Technau, Olivia Keiser, Matthias Egger, Andrew Boulle, International Epidemiologic Databases to Evaluate AIDS Southern Africa (IeDEA-SA) Collaboration (2011) Virologic failure and second-line antiretroviral therapy in children in South Africa--the IeDEA Southern Africa collaboration., Journal of acquired immune deficiency syndromes (1999) 56(3), p. 270-8, url, doi:10.1097/QAI.0b013e3182060610

2010

Mary Mahy, Charlotte Lewden, Martin W G Brinkhof, Francois Dabis, Jean-Michel Tassie, Yves Souteyrand, John Stover (2010) Derivation of parameters used in Spectrum for eligibility for antiretroviral therapy and survival on antiretroviral therapy., Sexually transmitted infections 86 Suppl 2(Suppl 2), p. ii28-34, url, doi:10.1136/sti.2010.044255

Martin W G Brinkhof, Ben D Spycher, Constantin Yiannoutsos, Ralf Weigel, Robin Wood, Eugène Messou, Andrew Boulle, Matthias Egger, Jonathan A C Sterne, International epidemiological Database to Evaluate AIDS (IeDEA) (2010) Adjusting mortality for loss to follow-up: analysis of five ART programmes in sub-Saharan Africa., PloS one 5(11), Geneviève Chêne (ed.), p. e14149, url, doi:10.1371/journal.pone.0014149

Stephen D Lawn, Robin Wood (2010) Immune reconstitution inflammatory syndrome., The Lancet. Infectious diseases 10(12), p. 833-4, url, doi:10.1016/S1473-3099(10)70280-2

Suzanne M Ingle, Margaret May, Kerry Uebel, Venessa Timmerman, Eduan Kotze, Max Bachmann, Jonathan A C Sterne, Matthias Egger, Lara Fairall, IeDEA-Southern Africa (2010) Outcomes in patients waiting for antiretroviral treatment in the Free State Province, South Africa: prospective linkage study., AIDS (London, England) 24(17), p. 2717-25, url, doi:10.1097/QAD.0b013e32833fb71f

Jean-Michel Tassie, Karen Malateste, Mar Pujades-Rodríguez, Elisabeth Poulet, Diane Bennett, Anthony Harries, Mary Mahy, Mauro Schechter, Yves Souteyrand, François Dabis, ART Linc of IeDEA and MSF Collaborations (2010) Evaluation of three sampling methods to monitor outcomes of antiretroviral treatment programmes in low- and middle-income countries., PloS one 5(11), Landon Myer (ed.), p. e13899, url, doi:10.1371/journal.pone.0013899

Margaret May, Andrew Boulle, Sam Phiri, Eugene Messou, Landon Myer, Robin Wood, Olivia Keiser, Jonathan A C Sterne, Francois Dabis, Matthias Egger, IeDEA Southern Africa and West Africa (2010) Prognosis of patients with HIV-1 infection starting antiretroviral therapy in sub-Saharan Africa: a collaborative analysis of scale-up programmes., Lancet (London, England) 376(9739), p. 449-57, url, doi:10.1016/S0140-6736(10)60666-6

Morna Cornell, Anna Grimsrud, Lara Fairall, Matthew P Fox, Gilles van Cutsem, Janet Giddy, Robin Wood, Hans Prozesky, Lerato Mohapi, Claire Graber, Matthias Egger, Andrew Boulle, Landon Myer, International Epidemiologic Databases to Evaluate AIDS Southern Africa (IeDEA-SA) Collaboration (2010) Temporal changes in programme outcomes among adult patients initiating antiretroviral therapy across South Africa, 2002-2007., AIDS (London, England) 24(14), p. 2263-70, url, doi:10.1097/QAD.0b013e32833d45c5

Lukas Fenner, Martin W G Brinkhof, Olivia Keiser, Ralf Weigel, Morna Cornell, Harry Moultrie, Hans Prozesky, Karl Technau, Brian Eley, Paula Vaz, Margaret Pascoe, Janet Giddy, Gilles Van Cutsem, Robin Wood, Matthias Egger, Mary-Ann Davies, International epidemiologic Databases to Evaluate AIDS in Southern Africa (2010) Early mortality and loss to follow-up in HIV-infected children starting antiretroviral therapy in Southern Africa., Journal of acquired immune deficiency syndromes (1999) 54(5), p. 524-32, url, doi:10.1097/QAI.0b013e3181e0c4cf

Ralf Weigel, Sam Phiri, Fred Chiputula, Joe Gumulira, Martin Brinkhof, Thomas Gsponer, Hannock Tweya, Matthias Egger, Olivia Keiser (2010) Growth response to antiretroviral treatment in HIV-infected children: a cohort study from Lilongwe, Malawi., Tropical medicine & international health : TM & IH 15(8), p. 934-44, url, doi:10.1111/j.1365-3156.2010.02561.x

Tom G Connell, Mary-Ann Davies, Christine Johannisen, Kathryn Wood, Sandy Pienaar, Katalin A Wilkinson, Robert J Wilkinson, Heather J Zar, David Beatty, Mark P Nicol, Nigel Curtis, Brian Eley (2010) Reversion and conversion of Mycobacterium tuberculosis IFN-gamma ELISpot results during anti-tuberculous treatment in HIV-infected children., BMC infectious diseases 10(1), p. 138, url, doi:10.1186/1471-2334-10-138

Monika Müller, Simon Wandel, Robert Colebunders, Suzanna Attia, Hansjakob Furrer, Matthias Egger, IeDEA Southern and Central Africa (2010) Immune reconstitution inflammatory syndrome in patients starting antiretroviral therapy for HIV infection: a systematic review and meta-analysis., The Lancet. Infectious diseases 10(4), p. 251-61, url, doi:10.1016/S1473-3099(10)70026-8

A Spaar, C Graber, F Dabis, A Coutsoudis, L Bachmann, J McIntyre, M Schechter, H W Prozesky, S Tuboi, D Dickinson, N Kumarasamy, M Pujdades-Rodriquez, E Sprinz, H J Schilthuis, P Cahn, N Low, M Egger, ART-LINC of IeDEA (2010) Prioritising prevention strategies for patients in antiretroviral treatment programmes in resource-limited settings., AIDS care 22(6), p. 775-83, url, doi:10.1080/09540120903349102

Suely Hiromi Tuboi, Antonio Guilherme Pacheco, Lee H Harrison, Roslyn A Stone, Margaret May, Martin W G Brinkhof, François Dabis, Matthias Egger, Denis Nash, David Bangsberg, Paula Braitstein, Constantin T Yiannoutsos, Robin Wood, Eduardo Sprinz, Mauro Schechter, ARTLINC of IeDEA (2010) Mortality associated with discordant responses to antiretroviral therapy in resource-constrained settings., Journal of acquired immune deficiency syndromes (1999) 53(1), p. 70-7, url, doi:10.1097/QAI.0b013e3181c22d19

Stephen D Lawn, David J Edwards, Robin Wood (2010) Reducing the burden of tuberculosis presenting during the initial months of antiretroviral therapy in resource-limited settings., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 50(1), p. 124-5; author reply 125, url, doi:10.1086/649007

Olivia Keiser, Hannock Tweya, Paula Braitstein, François Dabis, Patrick MacPhail, Andrew Boulle, Denis Nash, Robin Wood, Ruedi Lüthi, Martin W G Brinkhof, Mauro Schechter, Matthias Egger, ART-LINC of IeDEA Study Group (2010) Mortality after failure of antiretroviral therapy in sub-Saharan Africa., Tropical medicine & international health : TM & IH 15(2), p. 251-8, url, doi:10.1111/j.1365-3156.2009.02445.x

Suzanne M Ingle, Margaret May, Kerry Uebel, Venessa Timmerman, Eduan Kotze, Max Bachmann, Jonathan A C Sterne, Matthias Egger, Lara Fairall, IeDEA-SA (2010) Differences in access and patient outcomes across antiretroviral treatment clinics in the Free State province: a prospective cohort study., South African medical journal = Suid-Afrikaanse tydskrif vir geneeskunde 100(10), p. 675-81, pubmed

2009

Elena Losina, Hapsatou Touré, Lauren M Uhler, Xavier Anglaret, A David Paltiel, Eric Balestre, Rochelle P Walensky, Eugène Messou, Milton C Weinstein, François Dabis, Kenneth A Freedberg, ART-LINC Collaboration of International Epidemiological Databases to Evaluate AIDS (IeDEA), CEPAC International investigators (2009) Cost-effectiveness of preventing loss to follow-up in HIV treatment programs: a Côte d'Ivoire appraisal., PLoS medicine 6(10), John Bartlett (ed.), p. e1000173, url, doi:10.1371/journal.pmed.1000173

Margaret May, Robin Wood, Landon Myer, Patrick Taffé, Andri Rauch, Manuel Battegay, Matthias Egger, Cape Town AIDS Cohort, Swiss HIV Cohort Study (2009) CD4(+) T cell count decreases by ethnicity among untreated patients with HIV infection in South Africa and Switzerland., The Journal of infectious diseases 200(11), p. 1729-35, url, doi:10.1086/648096

Mary-Ann Davies, Graeme Meintjes (2009) Assessing the contribution of the immune reconstitution inflammatory syndrome to mortality in developing country antiretroviral therapy programs., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 49(6), p. 973-5, url, doi:10.1086/605501

Morna Cornell, Landon Myer, Richard Kaplan, Linda-Gail Bekker, Robin Wood (2009) The impact of gender and income on survival and retention in a South African antiretroviral therapy programme., Tropical medicine & international health : TM & IH 14(7), p. 722-31, url, doi:10.1111/j.1365-3156.2009.02290.x

Olivia Keiser, Patrick MacPhail, Andrew Boulle, Robin Wood, Mauro Schechter, François Dabis, Eduardo Sprinz, Matthias Egger, ART-LINC Collaboration of the International Databases to Evaluate AIDS (IeDEA) (2009) Accuracy of WHO CD4 cell count criteria for virological failure of antiretroviral therapy., Tropical medicine & international health : TM & IH 14(10), p. 1220-5, url, doi:10.1111/j.1365-3156.2009.02338.x

ART-LINC of IeDEA Study Group, Olivia Keiser, Hannock Tweya, Andrew Boulle, Paula Braitstein, Mauro Schecter, Martin W G Brinkhof, François Dabis, Suely Tuboi, Eduardo Sprinz, Mar Pujades-Rodriguez, Alexandra Calmy, Nagalingeswaran Kumarasamy, Denis Nash, Andreas Jahn, Patrick MacPhail, Ruedi Lüthy, Robin Wood, Matthias Egger (2009) Switching to second-line antiretroviral therapy in resource-limited settings: comparison of programmes with and without viral load monitoring., AIDS (London, England) 23(14), p. 1867-74, url, doi:10.1097/QAD.0b013e32832e05b2

Martin W G Brinkhof, Andrew Boulle, Ralf Weigel, Eugène Messou, Colin Mathers, Catherine Orrell, François Dabis, Margaret Pascoe, Matthias Egger, International Epidemiological Databases to Evaluate AIDS (IeDEA) (2009) Mortality of HIV-infected patients starting antiretroviral therapy in sub-Saharan Africa: comparison with HIV-unrelated mortality., PLoS medicine 6(4), David R. Bangsberg (ed.), p. e1000066, url, doi:10.1371/journal.pmed.1000066

Mary-Ann Davies, Tom Connell, Christine Johannisen, Kathryn Wood, Sandy Pienaar, Katalin A Wilkinson, Robert J Wilkinson, Heather J Zar, Brian Eley, David Beatty, Nigel Curtis, Mark P Nicol (2009) Detection of tuberculosis in HIV-infected children using an enzyme-linked immunospot assay., AIDS (London, England) 23(8), p. 961-9, url, doi:10.1097/QAD.0b013e32832956ad

Mary-Ann Davies, Olivia Keiser, Karl Technau, Brian Eley, Helena Rabie, Gilles van Cutsem, Janet Giddy, Robin Wood, Andrew Boulle, Matthias Egger, Harry Moultrie, International Epidemiologic Databases to Evaluate AIDS Southern Africa (IeDEA-SA) Collaboration (2009) Outcomes of the South African National Antiretroviral Treatment Programme for children: the IeDEA Southern Africa collaboration., South African medical journal = Suid-Afrikaanse tydskrif vir geneeskunde 99(10), p. 730-7, pubmed

Mary-Ann Davies, Matthias Egger, Olivia Keiser, Andrew Boulle (2009) Paediatric antiretroviral treatment programmes in sub-Saharan Africa: a review of published clinical studies., African journal of AIDS research : AJAR 8(3), p. 329-338, pubmed, doi:10.2989/AJAR.2009.8.3.9.930

Morna Cornell, Karl Technau, Lara Fairall, Robin Wood, Harry Moultrie, Gilles van Cutsem, Janet Giddy, Lerato Mohapi, Brian Eley, Patrick MacPhail, Hans Prozesky, Helena Rabie, Mary-Ann Davies, Nicola Maxwell, Andrew Boulle, International epidemiologic Databases to Evaluate AIDS Southern Africa Collaboration (2009) Monitoring the South African National Antiretroviral Treatment Programme, 2003-2007: the IeDEA Southern Africa collaboration., South African medical journal = Suid-Afrikaanse tydskrif vir geneeskunde 99(9), p. 653-60, pubmed

2008

Robin Wood (2008) Atazanavir: its role in HIV treatment., Expert review of anti-infective therapy 6(6), p. 785-96, url, doi:10.1586/14787210.6.6.785

Matthias Egger, Andrew Boulle (2008) Population effect of scaling up ART in resource-poor settings., Lancet (London, England) 371(9624), p. 1558-9, url, doi:10.1016/S0140-6736(08)60669-8

Mary-Ann Davies, Andrew Boulle, Tanzeem Fakir, James Nuttall, Brian Eley (2008) Adherence to antiretroviral therapy in young children in Cape Town, South Africa, measured by medication return and caregiver self-report: a prospective cohort study., BMC pediatrics 8(1), p. 34, url, doi:10.1186/1471-2431-8-34

Denis Nash, Monica Katyal, Martin W G Brinkhof, Olivia Keiser, Margaret May, Rachael Hughes, Francois Dabis, Robin Wood, Eduardo Sprinz, Mauro Schechter, Matthias Egger, ART-LINC Collaboration of IeDEA (2008) Long-term immunologic response to antiretroviral therapy in low-income countries: a collaborative analysis of prospective studies., AIDS (London, England) 22(17), p. 2291-302, url, doi:10.1097/QAD.0b013e3283121ca9

ART-LINC Collaboration of International Databases to Evaluate AIDS (IeDEA), Olivia Keiser, Kathryn Anastos, Mauro Schechter, Eric Balestre, Landon Myer, Andrew Boulle, David Bangsberg, Hapsatou Touré, Paula Braitstein, Eduardo Sprinz, Denis Nash, Mina Hosseinipour, François Dabis, Margaret May, Martin W G Brinkhof, Matthias Egger (2008) Antiretroviral therapy in resource-limited settings 1996 to 2006: patient characteristics, treatment regimens and monitoring in sub-Saharan Africa, Asia and Latin America., Tropical medicine & international health : TM & IH 13(7), p. 870-9, url, doi:10.1111/j.1365-3156.2008.02078.x

Olivia Keiser, Catherine Orrell, Matthias Egger, Robin Wood, Martin W G Brinkhof, Hansjakob Furrer, Gilles van Cutsem, Bruno Ledergerber, Andrew Boulle, Swiss HIV Cohort Study (SHCS) and the International Epidemiologic Databases to Evaluate AIDS in Southern Africa (IeDEA-SA) (2008) Public-health and individual approaches to antiretroviral therapy: township South Africa and Switzerland compared., PLoS medicine 5(7), David Bangsberg (ed.), p. e148, url, doi:10.1371/journal.pmed.0050148

Paula Braitstein, Andrew Boulle, Denis Nash, Martin W G Brinkhof, François Dabis, Christian Laurent, Mauro Schechter, Suely H Tuboi, Eduardo Sprinz, Paolo Miotti, Mina Hosseinipour, Margaret May, Matthias Egger, David R Bangsberg, Nicola Low, Antiretroviral Therapy in Lower Income Countries (ART-LINC) study group (2008) Gender and the use of antiretroviral treatment in resource-constrained settings: findings from a multicenter collaboration., Journal of women's health (2002) 17(1), p. 47-55, url, doi:10.1089/jwh.2007.0353

Mathieu Forster, Christopher Bailey, Martin W G Brinkhof, Claire Graber, Andrew Boulle, Mark Spohr, Eric Balestre, Margaret May, Olivia Keiser, Andreas Jahn, Matthias Egger, ART-LINC collaboration of International Epidemiological Databases to Evaluate AIDS (2008) Electronic medical record systems, data quality and loss to follow-up: survey of antiretroviral therapy programmes in resource-limited settings., Bulletin of the World Health Organization 86(12), p. 939-47, pubmed

Andrew Boulle, Peter Bock, Meg Osler, Karen Cohen, Liezl Channing, Katherine Hilderbrand, Eula Mothibi, Virginia Zweigenthal, Neviline Slingers, Keith Cloete, Fareed Abdullah (2008) Antiretroviral therapy and early mortality in South Africa., Bulletin of the World Health Organization 86(9), p. 678-87, pubmed

Elise Arrivé, Daniel J Kyabayinze, Benoit Marquis, Nathan Tumwesigye, Mary-Pat Kieffer, Alain Azondekon, Louise Wemin, Patricia Fassinou, Marie-Louise Newell, Valériane Leroy, Elaine J Abrams, Mark Cotton, Andrew Boulle, Dorothy Mbori-Ngacha, François Dabis, KIDS-ART-LINC Collaboration (2008) Cohort profile: the paediatric antiretroviral treatment programmes in lower-income countries (KIDS-ART-LINC) collaboration., International journal of epidemiology 37(3), p. 474-80, pubmed, doi:10.1093/ije/dym216

Martin W G Brinkhof, François Dabis, Landon Myer, David R Bangsberg, Andrew Boulle, Denis Nash, Mauro Schechter, Christian Laurent, Olivia Keiser, Margaret May, Eduardo Sprinz, Matthias Egger, Xavier Anglaret, ART-LINC, IeDEA (2008) Early loss of HIV-infected patients on potent antiretroviral therapy programmes in lower-income countries., Bulletin of the World Health Organization 86(7), p. 559-67, pubmed

2007

Antiretroviral Therapy in Low-Income Countries Collaboration of the International epidemiological Databases to Evaluate AIDS (IeDEA), ART Cohort Collaboration, Martin W G Brinkhof, Matthias Egger, Andrew Boulle, Margaret May, Mina Hosseinipour, Eduardo Sprinz, Paula Braitstein, François Dabis, Peter Reiss, David R Bangsberg, Martin Rickenbach, Jose M Miro, Landon Myer, Amanda Mocroft, Denis Nash, Olivia Keiser, Margaret Pascoe, Stefaan van der Borght, Mauro Schechter (2007) Tuberculosis after initiation of antiretroviral therapy in low-income and high-income countries., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 45(11), p. 1518-21, pubmed, doi:10.1086/522986

Andrew Boulle, Catherine Orrel, Richard Kaplan, Gilles Van Cutsem, Matthew McNally, Katherine Hilderbrand, London Myer, Matthias Egger, David Coetzee, Gary Maartens, Robin Wood, International Epidemiological Databases to Evaluate Aids in Southern Africa Collaboration (2007) Substitutions due to antiretroviral toxicity or contraindication in the first 3 years of antiretroviral therapy in a large South African cohort., Antiviral therapy 12(5), p. 753-60, pubmed

Suely H Tuboi, Martin W G Brinkhof, Matthias Egger, Roslyn A Stone, Paula Braitstein, Denis Nash, Eduardo Sprinz, François Dabis, Lee H Harrison, Mauro Schechter (2007) Discordant responses to potent antiretroviral treatment in previously naive HIV-1-infected adults initiating treatment in resource-constrained countries: the antiretroviral therapy in low-income countries (ART-LINC) collaboration., Journal of acquired immune deficiency syndromes (1999) 45(1), p. 52-9, pubmed, doi:10.1097/QAI.0b013e318042e1c3