Administrative resources

SOPs and Other Resource Documents

IeDEA Data Exchange Standard (with access to IeDEA Multiregional Data Transfer Protocol): iedeades.org

IeDEA Data Tools GitHub: iedea.github.io

Funding Acknowledgements

Nijhawan, Ank E.; Mathews, W. Christopher; Raifman, Julia; Fleming, Julia; Gebo, Kelly A. et al. (2021). Hospitalization rates among persons with HIV who gained Medicaid or private insurance after the Affordable Care Act in 2014. Journal of Acquired Immune Deficiency Syndromes (1999). http://doi.org/10.1097/QAI.0000000000002645.

Mageras, Anna; Brazier, Ellen; Niyongabo, Théodore; Murenzi, Gad; D’Amour Sinayobye, Jean et al. (2021). Comparison of cohort characteristics in Central Africa International Epidemiology Databases to Evaluate AIDS and Demographic Health Surveys: Rwanda and Burundi. International Journal of STD & AIDS, S. 956462420983783. http://doi.org/10.1177/0956462420983783.

Collins, Lauren F.; Colasanti, Jonathan A.; Nguyen, Minh L.; Moran, Caitlin A.; Lahiri, Cecile D. et al. (2021). The COVID-19 pandemic as a catalyst for differentiated care models to end the HIV epidemic in the United States: applying lessons from high-burden settings. AIDS (London, England), 35 (2), S. 337–341. http://doi.org/10.1097/QAD.0000000000002746.

Tsondai, Priscilla Ruvimbo; Davies, Mary-Ann; Singtoroj, Thida; Maxwell, Nicola; McGowan, Catherine C. et al. (2021). Improving Methods to Classify Perinatal versus Nonperinatal HIV Acquisition in Young Adolescents 10-14 Years of Age. The Pediatric Infectious Disease Journal. http://doi.org/10.1097/INF.0000000000003059.

Muchengeti, Mazvita; Bohlius, Julia & Dhokotera, Tafadzwa G. (2021). Conjunctival cancer in people living with HIV. Current Opinion in Infectious Diseases, 34 (1), S. 1–7. http://doi.org/10.1097/QCO.0000000000000705.

Sudjaritruk, Tavitiya; Aurpibul, Linda; Songtaweesin, Wipaporn Natalie; Narkpongphun, Assawin; Thisayakorn, Paul et al. (2021). Integration of mental health services into HIV healthcare facilities among Thai adolescents and young adults living with HIV. Journal of the International AIDS Society, 24 (2), S. e25668. http://doi.org/10.1002/jia2.25668.

Ujeneza, Eva Liliane; Ndifon, Wilfred; Sawry, Shobna; Fatti, Geoffrey; Riou, Julien et al. (2021). A mechanistic model for long-term immunological outcomes in South African HIV-infected children and adults receiving ART. ELife, 10. http://doi.org/10.7554/eLife.42390.

Agler, Robert A.; Zivich, Paul N.; Kawende, Bienvenu; Behets, Frieda & Yotebieng, Marcel (2021). Postpartum depressive symptoms following implementation of the 10 steps to successful breastfeeding program in Kinshasa, Democratic Republic of Congo: A cohort study. PLOS Medicine, 18 (1), S. e1003465–e1003465. http://doi.org/10.1371/journal.pmed.1003465.

Castilho, Jessica L.; Kim, Ahra; Jenkins, Cathy A.; Grinsztejn, Beatriz; Gotuzzo, Eduardo et al. (2021). Antiretroviral therapy and Kaposi’s sarcoma trends and outcomes among adults with HIV in Latin America. Journal of the International AIDS Society, 24 (1). http://doi.org/10.1002/jia2.25658.

Pierz, Amanda J.; Ajeh, Rogers; Fuhngwa, Norbert; Nasah, Judith; Dzudie, Anastase et al. (2021). Acceptability of Self-Sampling for Cervical Cancer Screening Among Women Living With HIV and HIV-Negative Women in Limbé, Cameroon. Frontiers in Reproductive Health, 2, S. 561202–561202. http://doi.org/10.3389/frph.2020.561202.

Pereira, Gerson Fernando Mendes; Kim, Ahra; Jalil, Emilia M.; Fernandes Fonseca, Fernanda; Shepherd, Bryan E. et al. (2021). Dolutegravir and pregnancy outcomes in women on antiretroviral therapy in Brazil: a retrospective national cohort study. The Lancet. HIV, 8 (1), S. e33–e41. http://doi.org/10.1016/S2352-3018(20)30268-X.

Ruffieux, Y.; Muchengeti, M.; Egger, M.; Efthimiou, O.; Bartels, L. et al. (2021). Immunodeficiency and Cancer in 3.5 Million People Living with Human Immunodeficiency Virus: the South African HIV Cancer Match Study. Clinical Infectious Diseases. http://doi.org/10.1093/cid/ciab087.

Petoumenos, Kathy; Kuwanda, Locadiah; Ryom, Lene; Mocroft, Amanda; Reiss, Peter et al. (2020). Effect of changes in body mass index on the risk of cardiovascular disease and diabetes mellitus in HIV-positive individuals: results from the D: A: D study. Journal of Acquired Immune Deficiency Syndromes (1999), Publish Ahead of Print. http://doi.org/10.1097/QAI.0000000000002603.

Desmonde, Sophie; Ciaranello, Andrea L.; Malateste, Karen; Musick, Beverly; Patten, Gabriela et al. (2020). Age-specific mortality rate ratios in adolescents and youth aged 10–24 years living with perinatally versus non-perinatally-acquired HIV. AIDS, Publish Ahead of Print. http://doi.org/10.1097/QAD.0000000000002765.

Giganti, Mark J. & Shepherd, Bryan E. (2020). Multiple-Imputation Variance Estimation in Studies With Missing or Misclassified Inclusion Criteria. American Journal of Epidemiology, 189 (12), S. 1628–1632. http://doi.org/10.1093/aje/kwaa153.

Tsondai, Priscilla R.; Braithwaite, Kate; Fatti, Geoffrey; Bolton Moore, Carolyn; Chimbetete, Cleophas et al. (2020). Characteristics and outcomes of adolescents living with perinatally acquired HIV within Southern Africa. AIDS (London, England), 34 (15), S. 2275–2284. http://doi.org/10.1097/QAD.0000000000002683.

Taghavi, Katayoun; Rohner, Eliane; Basu, Partha; Low, Nicola; Rutjes, Anne et al. (2020). Screening test accuracy of portable devices that can be used to perform colposcopy for detecting CIN2+ in low- and middle-income countries: a systematic review and meta-analysis. BMC Women’s Health, 20 (1). http://doi.org/10.1186/s12905-020-01121-3.

Bernard, Charlotte; Font, Hélène; Diallo, Zélica; Ahonon, Richard; Tine, Judicaël Malick et al. (2020). Prevalence and factors associated with severe depressive symptoms in older west African people living with HIV. BMC Psychiatry, 20 (1), S. 442–442. http://doi.org/10.1186/s12888-020-02837-0.

Hauser, Anthony; Kusejko, Katharina; Johnson, Leigh F.; Günthard, Huldrych F.; Riou, Julien et al. (2020). Impact of scaling up dolutegravir on antiretroviral resistance in South Africa: A modeling study. PLOS Medicine, 17 (12), S. e1003397–e1003397. http://doi.org/10.1371/journal.pmed.1003397.

Marbaniang, Ivan; Sangle, Shashikala; Nimkar, Smita; Zarekar, Kanta; Salvi, Sonali et al. (2020). The burden of anxiety among people living with HIV during the COVID-19 pandemic in Pune, India. BMC Public Health, 20 (1). http://doi.org/10.1186/s12889-020-09656-8.

Penn-Nicholson, Adam; Mbandi, Stanley Kimbung; Thompson, Ethan; Mendelsohn, Simon C.; Suliman, Sara et al. (2020). RISK6, a 6-gene transcriptomic signature of TB disease risk, diagnosis and treatment response. Scientific Reports, 10 (1). http://doi.org/10.1038/s41598-020-65043-8.

Oliveira-de-Souza, Deivide; Vinhaes, Caian L.; Arriaga, María B.; Kumar, Nathella Pavan; Queiroz, Artur T. L. et al. (2020). Aging increases the systemic molecular degree of inflammatory perturbation in patients with tuberculosis. Scientific Reports, 10 (1). http://doi.org/10.1038/s41598-020-68255-0.

Haas, Andreas D.; Technau, Karl‐Günter; Pahad, Shenaaz; Braithwaite, Kate; Madzivhandila, Mampho et al. (2020). Mental health, substance use and viral suppression in adolescents receiving ART at a paediatric HIV clinic in South Africa. Journal of the International AIDS Society, 23 (12). http://doi.org/10.1002/jia2.25644.

Anderegg, Nanina; Hector, Jonas; Jefferys, Laura F.; Burgos-Soto, Juan; Hobbins, Michael A. et al. (2020). Loss to follow-up correction increased mortality estimates in HIV–positive people on antiretroviral therapy in Mozambique. Journal of Clinical Epidemiology, 128, S. 83–92. http://doi.org/10.1016/j.jclinepi.2020.08.012.

Han, W. M.; Jiamsakul, A.; Jantarapakde, J.; Yunihastuti, E.; Choi, J. Y. et al. (2020). Association of body mass index with immune recovery, virological failure and cardiovascular disease risk among people living with HIV. HIV Medicine. http://doi.org/10.1111/hiv.13017.

Mpofu, Philani B.; Bakoyannis, Giorgos; Yiannoutsos, Constantin T.; Mwangi, Ann W. & Mburu, Margaret (2020). A pseudo‐likelihood method for estimating misclassification probabilities in competing‐risks settings when true‐event data are partially observed. Biometrical Journal, 62 (7), S. 1747–1768. http://doi.org/10.1002/bimj.201900198.

Tao, Ran; Lotspeich, Sarah C.; Amorim, Gustavo; Shaw, Pamela A. & Shepherd, Bryan E. (2020). Efficient semiparametric inference for two-phase studies with outcome and covariate measurement errors. Statistics in Medicine, S. sim.8799-sim.8799. http://doi.org/10.1002/sim.8799.

Ross, J.; Jiamsakul, A.; Kumarasamy, N.; Azwa, I.; Merati, T. P. et al. (2020). Virological failure and HIV drug resistance among adults living with HIV on second-line antiretroviral therapy in the Asia-Pacific. HIV Medicine, S. hiv.13006-hiv.13006. http://doi.org/10.1111/hiv.13006.

Haas, Andreas D.; Radin, Elizabeth; Hakim, Avi J.; Jahn, Andreas; Philip, Neena M. et al. (2020). Prevalence of nonsuppressed viral load and associated factors among HIV-positive adults receiving antiretroviral therapy in Eswatini, Lesotho, Malawi, Zambia and Zimbabwe (2015 to 2017): results from population-based nationally representative surveys. Journal of the International AIDS Society, 23 (11), S. e25631. http://doi.org/10.1002/jia2.25631.

Arikawa, Shino; Dumazert, Patricia; Messou, Eugène; Burgos-Soto, Juan; Tiendrebeogo, Thierry et al. (2020). Childbearing desire and reproductive behaviors among women living with HIV: A cross-sectional study in Abidjan, Côte d’Ivoire. PLoS ONE, 15 (10 October). http://doi.org/10.1371/journal.pone.0239859.

Patsis, Ioannis; Goodrich, Suzanne; Yiannoutsos, Constantin T.; Brown, Steven A.; Musick, Beverly S. et al. (2020). Lower rates of ART initiation and decreased retention among ART-naïve patients who consume alcohol enrolling in HIV care and treatment programs in Kenya and Uganda. PLoS ONE, 15 (10 October 2020). http://doi.org/10.1371/journal.pone.0240654.

Haas, Andreas D.; Ruffieux, Yann; van den Heuvel, Leigh Luella; Lund, Crick; Boulle, Andrew et al. (2020). Excess mortality associated with mental illness in people living with HIV in Cape Town, South Africa: a cohort study using linked electronic health records. The Lancet Global Health, 8 (10), S. e1326–e1334. http://doi.org/10.1016/S2214-109X(20)30279-5.

Rebeiro, Peter F.; Duda, Stephany N.; Wools-Kaloustian, Kara K.; Nash, Denis & Althoff, Keri N. (2020). Implications of COVID-19 for HIV Research: data sources, indicators and longitudinal analyses. Journal of the International AIDS Society, 23 (10), S. e25627–e25627. http://doi.org/10.1002/jia2.25627.

Desmonde, Sophie; Neilan, Anne M.; Musick, Beverly; Patten, Gabriela; Chokephaibulkit, Kulkanya et al. (2020). Time-varying age- and CD4-stratified rates of mortality and WHO stage 3 and stage 4 events in children, adolescents and youth 0 to 24 years living with perinatally acquired HIV, before and after antiretroviral therapy initiation in the paediatric IeDEA Gl. Journal of the International AIDS Society, 23 (10), S. e25617–e25617. http://doi.org/10.1002/jia2.25617.

Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee et al. (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-Naive Patients. Antimicrobial Agents and Chemotherapy, 64 (11). http://doi.org/10.1128/AAC.00513-20.

Demitto, Fernanda O.; Araújo-Pereira, Mariana; Schmaltz, Carolina A.; Sant’Anna, Flávia M.; Arriaga, María B. et al. (2020). Impact of Persistent Anemia on Systemic Inflammation and Tuberculosis Outcomes in Persons Living With HIV. Frontiers in Immunology, 11. http://doi.org/10.3389/fimmu.2020.588405.

Boulle, Andrew; Davies, Mary-Ann; Hussey, Hannah; Ismail, Muzzammil; Morden, Erna et al. (2020). Risk factors for COVID-19 death in a population cohort study from the Western Cape Province, South Africa. Clinical Infectious Diseases. http://doi.org/10.1093/cid/ciaa1198.

Marbaniang, Ivan; Sangle, Shashikala; Nimkar, Smita; Zarekar, Kanta; Salvi, Sonali et al. (2020). The Burden of Anxiety During the COVID-19 Pandemic Among People Living with HIV (PLHIV) in Pune, India. Research Square. http://doi.org/10.21203/rs.3.rs-45412/v1.

Seth, Divya; Williams, Victoria L.; McMahon, Devon E.; Regan, Susan; Busakhala, Naftali et al. (2020). The role of dermatology in Kaposi sarcoma diagnosis across three regions in sub-Saharan Africa. Journal of the American Academy of Dermatology. http://doi.org/10.1016/j.jaad.2020.07.114.

Parcesepe, Angela M.; Lancaster, Kathryn; Edelman, E. Jennifer; DeBoni, Raquel; Ross, Jeremy et al. (2020). Substance use service availability in HIV treatment programs: Data from the global IeDEA consortium, 2014-2015 and 2017. PLoS ONE, 15 (8 August), S. e0237772–e0237772. http://doi.org/10.1371/journal.pone.0237772.

Zürcher, Kathrin; Morrow, Carl; Riou, Julien; Ballif, Marie; Koch, Anastasia Sideris et al. (2020). Novel approach to estimate tuberculosis transmission in primary care clinics in sub-Saharan Africa: protocol of a prospective study. BMJ Open, 10 (8), S. e036214–e036214. http://doi.org/10.1136/bmjopen-2019-036214.

Sohn, Annette H.; Lumbiganon, Pagakrong; Kurniati, Nia; Lapphra, Keswadee; Law, Matthew et al. (2020). Determining standardized causes of death of infants, children, and adolescents living with HIV in Asia. AIDS (London, England), 34 (10), S. 1527–1537. http://doi.org/10.1097/QAD.0000000000002583.

Yunihastuti, Evy; Teeratakulpisarn, Nipat; Jeo, Wifanto Saditya; Nilasari, Hanny; Rachmadi, Lisnawati et al. (2020). Incidence, clearance, persistence and factors related with high-risk anal HPV persistence in South-East Asian MSM and transgender women. AIDS (London, England). http://doi.org/10.1097/QAD.0000000000002654.

Loiseau, Chloé; Brites, Daniela; Reinhard, Miriam; Zürcher, Kathrin; Borrell, Sonia et al. (2020). HIV coinfection is associated with low fitness rpoB variants in rifampicin-resistant Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. http://doi.org/10.1128/AAC.00782-20.

Duda, Stephany N.; Musick, Beverly S.; Davies, Mary-Ann; Sohn, Annette H.; Ledergerber, Bruno et al. (2020). The IeDEA Data Exchange Standard: a common data model for global HIV cohort collaboration (preprint). Health Informatics. https://doi.org/10.1101/2020.07.22.20159921

Adedimeji, Adebola; Ajeh, Rogers; Dzudie, Anastase; Kendowo, Ernestine; Fuhngwa, Norbert et al. (2020). Cervical human papillomavirus DNA detection in women living with HIV and HIV-uninfected women living in Limbe, Cameroon. Journal of Clinical Virology, 128. http://doi.org/10.1016/j.jcv.2020.104445.

Chan, Andrew T.; Drew, David A.; Nguyen, Long H.; Joshi, Amit D.; Ma, Wenjie et al. (2020). The COronavirus Pandemic Epidemiology (COPE) Consortium: A Call to Action. Cancer Epidemiology, Biomarkers & Prevention : A Publication of the American Association for Cancer Research, Cosponsored by the American Society of Preventive Oncology, 29 (7), S. 1283–1289. http://doi.org/10.1158/1055-9965.EPI-20-0606.

Patten, Gabriela; Puthanakit, Thanyawee; McGowan, Catherine C.; Wools-Kaloustian, Kara; Hazra, Rohan et al. (2020). Raltegravir use and outcomes among children and adolescents living with HIV in the IeDEA global consortium. Journal of the International AIDS Society, 23 (7). http://doi.org/10.1002/jia2.25580.

Zaniewski, Elizabeth; Dao Ostinelli, Cam H.; Chammartin, Frédérique; Maxwell, Nicola; Davies, Mary-Ann et al. (2020). Trends in CD4 and viral load testing 2005 to 2018: multi-cohort study of people living with HIV in Southern Africa. Journal of the International AIDS Society, 23 (7), S. e25546–e25546. http://doi.org/10.1002/jia2.25546.

Tchounga, Boris; Horo, Apollinaire; Boni, Simon; Tanon, Aristophane; Folquet, Madeleine Amorissani et al. (2020). Human papilloma viruses infection among adolescent females perinatally infected with HIV in Côte d’Ivoire. Sexually Transmitted Infections, S. sextrans-2019-054420. http://doi.org/10.1136/sextrans-2019-054420.